Sphingomonas sp. CL5.1: F9288_16415
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Entry
F9288_16415 CDS
T11042
Name
(Genbank) BamA/TamA family outer membrane protein
KO
K07278
translocation and assembly module TamA
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_16415
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_16415
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-ProteinID:
QKS01032
LinkDB
All DBs
Position
complement(3400011..3402146)
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AA seq
711 aa
AA seq
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MHDRHETDWKITRCPCPGKRSNSIVRPESIRGSCVGFAVVRLCRVATALLVATSSLAHAQ
STRQPPADPQANAPIVPDAEFDKALPPLSGDLNAPLEPMPAPEPEDTQIEQPLPPISSFE
TTPLETAADVKDKAATEIRYETVVRGLDAIDLDDQFRSLSALRKGGGKAANATQISARAH
EDEALAVRLMKSLGYYDGVAHSVIEPIPGETGKVRAIVSASPGKLYRLGAINVVAPPTVP
PGLIRAQLPLKTGDPIDAARIEGAEANVSLVLPQRGYPFAKVGDRDILLDDQTLTGDYTL
PVETGPRGSFGKLRTTGDPVFGLKHLNVFPRFKPGDLYDSRLTDDLRKALAATGMFNSIS
VEPVATGEAGPDGTELVDLLVNQTKGKTRSIAATAGYGTGEGIKLEGTWTSRNMFPPEGA
LILAATAGTQQQGASATFRRANAGRRDRTFSLIAGLNHQNYDAFDAYTGTLAVRWSYDST
PLWQKKLTYAYGAELTGTNESVYDFARGDRVRRTYGIAALPVQVLWDTSDDLLNPTRGYR
VKLNLSPETSVQGSVAPYARTMIEGTFYYPVSDSLVVAGRARAGSILGIARDDLAPSRRY
YGGGGGSVRGFGYQRLGPLDPQGNPVGGRSLNEFALEARYRFGNFGIVPFVDAGNAYESV
LPKGNDLRFGAGIGGRFYTNFGPMRVDVATPLNPRKGDGRIALYISIGQAF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaccggcatgaaaccgattggaaaatcacacgttgcccttgtccggggaaaaga
tcgaattctatcgtgcgcccggaatcgataaggggatcgtgcgtgggatttgcggttgtt
cgtctctgccgggtggcgaccgccttgctcgttgcgacatcatcgctggcccatgcgcag
tccacccggcaacctcccgccgatccgcaggccaatgcgccgatcgtccccgacgcggag
ttcgacaaggcgctgcccccgctctcgggcgatctcaacgcgccgctggagccgatgccg
gcgcccgagccggaggatacgcagatcgagcagccgctgccgccgatctcatccttcgag
acgacgccgctcgagaccgccgccgacgtgaaggacaaggcggcgacggaaatccggtac
gagacggtcgtgcgcgggctggacgcgatcgatcttgacgaccagttccgctcgctctcc
gcgttgaggaagggtggcggcaaggcggcgaacgcgacgcagatttccgcccgcgcgcat
gaggacgaggcgctggcggtgcggctgatgaagtcgctcggctattatgacggcgtcgcc
cattcggtgatcgagccgatccccggcgagaccggcaaggtccgtgcgatcgtcagcgcc
tcgccgggcaagctctatcgcctcggcgcgatcaacgtcgtcgcgccgccgaccgtgccg
ccggggctgatccgcgcgcaattgccgctcaagaccggcgatccgatcgacgcggcgcgg
atcgagggcgcggaggccaatgtcagcctcgtcctgccgcagcgcggctatcccttcgcc
aaggtcggcgatcgcgatatcctgctcgacgaccagacgctgaccggcgactataccctg
ccggtcgagaccgggccgcgcggctcgttcggcaagctgcgcaccaccggcgatccggtg
ttcgggctgaagcacctcaacgtcttcccgcgtttcaagccgggcgacctctacgattcg
cggctgaccgacgatctgcgcaaggcgctggcggcgacggggatgttcaactcgatctcg
gtcgagccggtcgcgaccggggaggcggggccggacggcaccgaactggtcgacctcctc
gtcaaccagacgaagggcaagacgcgcagcatcgccgccaccgccggctatggcaccggg
gagggcatcaagctcgaaggcacctggaccagccgcaacatgttcccgccggaaggcgcg
ctgatcctcgccgccaccgccgggacgcagcagcagggcgcctccgccaccttccgccgc
gccaatgccggcaggcgcgaccgcaccttctcgctcatcgccggcctcaaccaccagaat
tacgacgcgttcgacgcctataccggcacgctggcggtgcggtggagctatgattccacg
ccgctgtggcagaagaagctgacctatgcctatggcgcggagctgaccggcaccaatgag
agcgtctatgattttgcgcgcggcgatcgcgtccggcgcacatatggcatcgcggcgctg
ccggtgcaggtgctgtgggacacgtcggacgatctgctcaacccgacgcgcggctatcgc
gtgaagctgaatctcagcccggagacgtcggtgcagggatcggtcgccccttatgcccgc
acgatgatcgagggcactttctattatccggtgtccgacagcctggtggtcgcgggccgg
gcgcgggccggatcgatcctgggcatcgcgcgcgacgatctcgcgccgtcgcggcgttat
tatggcggcggcggcggatcggtgcgcggcttcggctaccagcggctcgggccgctcgat
ccgcagggcaatccggtcggcgggcgcagcctcaacgagttcgcgctggaggcgcgctac
cgcttcggcaatttcgggatcgtgccgttcgtcgatgccggcaacgcctatgaaagcgtg
ctgcccaagggcaacgacctgcgcttcggcgccggcatcggcgggcgcttctacaccaat
ttcgggccgatgcgcgtcgacgtcgcgaccccgctcaatccgcgcaagggagatggcagg
atcgcgctatacatctcgatcgggcaggcgttctga
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