Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1547
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Entry
SPD_1547 CDS
T00413
Name
(GenBank) DNA-directed RNA polymerase omega chain, putative
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPD_1547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spd03021
]
SPD_1547
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_1547
Enzymes [BR:
spd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPD_1547
Transcription machinery [BR:
spd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPD_1547
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPD_1547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ABJ53875
UniProt:
Q04J38
LinkDB
All DBs
Position
complement(1571083..1571397)
Genome browser
AA seq
104 aa
AA seq
DB search
MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAPATQGFKSEKSTLRALEEIESGNVT
IHPDPEGKREAVRRRIEEEKRRKEEEEKKIKEQIAKEKEDGEKI
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaaaccctctattgataccttgctcgacaaggttccttcaaaatattcactc
gtaatcttggaagcaaaacgtgcccacgaattggaagcaggtgccccagcaactcaaggt
ttcaagtctgaaaaatcaactcttcgcgctttagaagaaatcgaatcaggaaacgttaca
attcacccagatccagaaggaaaacgtgaagcagtgcgtcgccgtatcgaagaagaaaaa
cgccgcaaagaagaagaagaaaagaaaatcaaagagcaaattgctaaagaaaaagaagat
ggtgaaaaaatttaa
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integrated database retrieval system
