Sphingopyxis sp. EG6: SPYCW_0242
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Entry
SPYCW_0242 CDS
T10392
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00906
Carotenoid biosynthesis
speg01100
Metabolic pathways
speg01110
Biosynthesis of secondary metabolites
Module
speg_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SPYCW_0242
Enzymes [BR:
speg01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
SPYCW_0242
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Motif
Pfam:
Lycopene_cycl
DAO
NAD_binding_9
Trp_halogenase
NAD_binding_8
Pyr_redox_2
FAD_binding_2
Thi4
FAD_oxidored
nec1
GIDA
Motif
Other DBs
NCBI-ProteinID:
BBB07226
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Position
265019..266176
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AA seq
385 aa
AA seq
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MTAPEPDFCDIAIVGGGLAGGLAALALAAKRPKLDVRLIEPDAIGGNHIWSFFDSDIAKR
DRWLVAPLVRYHWDRYDVAFPERERRVRMGYKSITGEALAEAVTAALPAGRIIADRAKHV
APDHVLLARGGRLSAKHVIDARGTGRTSMLDCGWQKFVGQALTVEGGHGIERPVVMDATV
EQLDGYRFAYLLPFDAETVFVEDTYYSNTPDLDVAAVRDRIATYAARRQWNVTAVTREET
GVLPVVVAGDFDRLWPQIDRVGRIGVRAGVFHAMTGYSLPDAVRTAAALPMLVDRGDLGP
RLRARAAAAWRRQRYYRMLGAMLFRAAEPDERYRIFQRFYGLAPGLIARFYAGRSNAADK
LRILAGKPPVSVRRALAALSKLDWK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccgaacccgatttttgcgacatcgctatcgtcggcggaggattggccgga
gggctcgcggcgctggcgctcgcggcgaagcggccgaagctcgacgtgcggctgatcgaa
cccgatgcgatcggcggcaatcacatctggtctttcttcgacagcgacattgccaagcgc
gaccgctggctcgtcgcgccgctcgtccgctatcattgggaccgttatgatgtcgccttt
ccggaacgcgagcgccgggtccgcatgggctacaaaagcatcactggcgaagcgctggcc
gaggcggtcaccgcggcgctgcctgcggggcggatcatcgccgaccgggccaagcatgtc
gcgcccgaccatgtgctgctggcgcgtggcggacgcttgtcggccaagcatgtcatcgat
gcgcgcggcaccggcaggacatcgatgctcgactgcggctggcagaaattcgtcggccag
gcgctgaccgtcgagggcgggcatggcatcgaacggccggtggtgatggacgcgacggtc
gagcagctcgacggctatcgcttcgcctatctgctgcccttcgatgccgagacggtgttc
gttgaggacacctattacagcaacacgcccgatctcgacgtcgcggcggtgcgcgaccgg
atcgcgacctatgcggcgcggcggcagtggaacgtcaccgcggtgacgcgcgaggagacc
ggggtgctgccggtggtcgtcgcgggcgatttcgaccggctgtggccgcagatcgatcgg
gtgggtcggatcggcgtacgtgccggggtgttccacgcgatgaccggctattcgttgccc
gatgcggtacgcactgcggcggcgctgcccatgctcgtcgatcgtggcgatctgggacca
cggctccgcgcgcgcgccgcggcggcctggcgccgccagcgttactaccgcatgctcggc
gcgatgctgttccgtgccgccgagccggacgagcgctaccggatattccagcgcttctat
ggcctcgcgcccggcctgatcgcgcgcttttacgcgggacggtcgaacgccgccgacaaa
ttgcgcatcctggcaggcaagccgcccgtatctgttcgccgcgcgcttgcggcgctttcg
aaactggactggaaatga
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