Sphingopyxis sp. EG6: SPYCW_2960
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Entry
SPYCW_2960 CDS
T10392
Name
(GenBank) ABC transporter
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
speg Sphingopyxis sp. EG6
Pathway
speg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPYCW_2960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_2960
Transporters [BR:
speg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SPYCW_2960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_21
AAA_29
AAA_30
nSTAND3
MMR_HSR1
AAA_18
AAA_33
Zeta_toxin
Cytidylate_kin
RsgA_GTPase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BBB09944
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Position
complement(3041098..3042912)
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AA seq
604 aa
AA seq
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MPPDTLTSADAAKEPPVLDTLKRFLPYLWPAGHRGHKVRIIGAGLIVLASKGVQLSMGFL
YGAAIDRMAPGMEEGVALAIGLVLAYAGARFAGVLFDNLRNVVFERVGQDATRELAIATF
SHLHALSLRFHLARRTGEVTKVIERGTKSIDTMLYFLLFNIAPTIIELAAVLIIFWTKFS
FGLASATALMVVVYIIFTRKVTDWRNALRTQMNDLDTLTIGRSVDSLLNYETVKYFGAEA
REEARYRDVADRYARAAVKSENSLAWLNIGQSLITNAALAGAMAYTVWGWSVGEYKVGDV
VLVNTLLAQLFRPLDMLGMVYRVIRQGLIDMEAMFRLIDTPPEISDAPDAAPLAVNGGAV
AFENVVFGYEADRTILNGVSFAVGAGETLAIVGPSGAGKSTIARLLFRFYDPQGGRITID
DQDIAAVTQASLRASIGIVPQDTVLFNDSIGYNIAYGREGAGAAEVAAAAEGAAIDGFIA
ILPQGYDTEVGERGLKLSGGEKQRVAIARTLLKNPPVLILDEATSALDSRTEAAIQDTLE
RIAARRTTLVIAHRLSTVTGADRIIVLDKGRVAETGTHDQLLAMRGLYADMWARQQAEKE
EGTV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgatacgctcacttccgccgatgcggccaaggaaccccccgttctcgatacg
ctgaagcgtttcctgccctatctgtggccagcggggcaccgcgggcacaaggttcgtatc
atcggggccgggctgatcgtgctggcgtcgaaaggcgtccagctgtcgatgggctttctc
tatggcgcggcgatcgaccggatggcgccggggatggaagagggcgtcgcgctggcgatc
gggctggtgctcgcctatgccggggcgcgctttgccggggtgttgttcgataatctccgc
aacgtcgtgttcgagcgcgtcgggcaggatgcgacgcgtgagctggcgatcgcgaccttc
agccatttgcacgcgctgagcctgcgctttcacctcgcgcggcggaccggcgaggtgacc
aaggtgatcgagcgcgggaccaagagtatcgacacgatgctctatttcctgctgttcaac
atcgcgccgacgatcatcgagctggctgcggtgctgatcatcttctggaccaagttcagc
tttggcctcgccagcgccaccgcgctgatggtggtcgtctatatcatcttcacgcgcaag
gtgaccgactggcgcaacgcgctgcgcacccagatgaacgacctcgacacgctgacgatc
gggcgcagcgtcgacagcctgctcaattacgaaacggtcaaatatttcggcgccgaagcc
cgcgaggaagcgcgctaccgcgacgttgccgatcgctacgcgcgcgccgcggtcaagagc
gagaacagcctggcgtggctgaacatcgggcagagcctgatcaccaacgccgcattggcg
ggggcgatggcctataccgtgtgggggtggtcggtcggcgagtataaggtcggcgacgtg
gtgctggtgaacaccctgctcgcgcagctgttccgcccgctcgacatgctcggcatggtg
taccgcgtgatccgccaggggctgatcgacatggaggcgatgttccgcctgatcgatacg
ccgccggagatttcggatgcgccggacgcggcgccgctggcggtcaacggcggcgcggtg
gcgttcgagaatgtcgtcttcggttatgaggcggaccgcacgatcctgaacggggtcagc
tttgcggtcggcgcaggcgagacgctggcgatcgtcggaccgtcgggggcgggcaagtcg
acgatcgcgcggctgctgttccgattctatgatccgcagggcgggcggatcacgatcgac
gatcaggatattgccgcggtgacgcaggccagcctgcgcgccagtatcggcatcgtgccg
caggacacggtgctgttcaacgacagcatcggttacaatatcgcctatggccgtgagggc
gccggcgctgccgaggttgcggcggcggccgagggcgcggcgatcgacggctttatcgcg
atcctgccgcagggctatgacaccgaggtcggcgagcgcgggctgaagctgtcgggcggc
gagaaacagcgcgtcgcgattgcgcggacattgctgaagaacccgccggtgctgatcctg
gatgaagcgacgagcgcgctcgacagccgcaccgaggcggcgatccaggacacgctcgag
cggatcgccgcgcggcgcacgaccttggtgatcgcgcaccgcctttcgacagtgacgggg
gcggaccggatcatcgtgctggacaagggccgcgtggcggaaacagggacgcacgaccaa
ttgctggcgatgcgcgggctgtacgccgacatgtgggcgcggcagcaggcggaaaaggaa
gaggggacggtttaa
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