Solanum pennellii: 107003271
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Entry
107003271 CDS
T04130
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
spen04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107003271
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107003271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107003271
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107003271
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107003271
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
107003271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
107003271
NCBI-ProteinID:
XP_015057061
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All DBs
Position
11:179531..181163
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AA seq
363 aa
AA seq
DB search
MTDISSVLHQDQEEEEKARCEWDFHLSTIISSCNNLSGSGCDTIGVLEFDPCGNFLASGG
IARKIRIYTVKSIEREGERRIGDAPLALDHSNACDFFICTPAKLGSIKWKPGLGSRVLGS
GDYDGVVMEYDLEKKMPVFERDEHGGRRVWSIDYCHSDPVLGASGSDDGTMQMWDPRCGD
NGKCLAMVQPTKEYSTPVCCVEFNPFKGPIVAVGCADRRVYAYDTRKMLDPLFVLDGHEK
AVTYIRFLDERTIISSSIDGCLKMWNAEDQKVLRTYKGHSNSRRFVGLSVWKSGGLICCG
SENNQVFVYDKRWGEPIWMYGREPRHEHGFVSSVCWQQKDENQCTLVAGDSDGVLRVFNG
KRK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacagatatttcatcagttttgcatcaagatcaagaagaagaagaaaaagcaagatgt
gaatgggattttcatctttctactattatttcatcttgtaataatcttagtggatctggt
tgtgacacaattggtgtgttggaatttgacccttgtggtaatttcctagcttctggtggt
attgctaggaaaattcgaatttacaccgtaaagtctatcgagagagaaggcgagaggcgt
atcggcgatgcgcctctcgctttagatcatagtaatgcatgtgatttttttatttgtact
ccggccaaactcgggagtataaagtggaaacccggtttagggagtcgggttttagggtcg
ggtgattacgatggagtggttatggagtatgacctagagaaaaaaatgcccgttttcgag
cgtgatgagcatggtggtagacgggtttggagcattgactattgtcattcggatccggtt
ttgggtgcatccggatccgatgacggaaccatgcaaatgtgggacccgcggtgcggtgac
aatggcaagtgtttagctatggtacaacctaccaaagagtatagtacacccgtgtgttgc
gtcgaatttaatccgttcaaaggtccaatcgtagccgttggatgcgctgaccggagggtc
tacgcgtatgatacgaggaaaatgcttgacccactctttgtcctggatggacatgagaaa
gcagttacttacattagatttcttgatgaacgtactattatttcttcgagcatagatggt
tgtttaaaaatgtggaatgcggaggaccagaaggtacttcgcacctacaaggggcatagt
aatagtaggaggtttgtagggttatcggtatggaaatcgggtggattaatttgttgtggc
tcagaaaataatcaagtttttgtatacgataagagatggggtgaaccaatatggatgtat
ggacgcgaaccaagacatgagcatgggttcgttagtagcgtatgttggcaacaaaaggac
gaaaatcaatgcacactcgtggctggagattcagatggtgttttacgagtttttaatggc
aagaggaaatga
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