Solanum pennellii: 107007007
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Entry
107007007 CDS
T04130
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107007007
03012 Translation factors [BR:
spen03012
]
107007007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107007007
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107007007
mRNA cycle factors
Stress granule specific factors
107007007
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-4
107007007
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107007007
Exosomal proteins of bladder cancer cells
107007007
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107007007
NCBI-ProteinID:
XP_015060972
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All DBs
Position
12:complement(80930128..80934843)
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AA seq
410 aa
AA seq
DB search
MAAEGSQFDTRQFDAKMTELLGTEQQEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKP
SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQ
IEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHI
KMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILV
KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRD
HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY
LHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaggttctcagtttgatactcgtcaattcgatgcgaaaatgacagaactg
cttggtactgaacaacaggaattcttcacatcatatgatgaggttcacgacagttttgat
gccatgggtttgcaagaaaatctcctgaggggcatctatgcctatggttttgagaagcca
tctgctattcagcaaaggggcattgttcctttttgcaagggccttgatgtcatccagcag
gcacaatctggtactggaaagacggcaactttctgctctggaattctccagcagcttgat
tacagtttagttgagtgtcaggctctggttcttgcaccaacccgtgagcttgcacaacag
attgagaaggttatgagagcacttggtgactaccttggtgtgaaggttcatgcttgtgtt
gggggtaccagtgtccgtgaggatcagcgcatccttcagagcggtgttcatgttgtggtt
ggtactccaggccgtgtctttgacatgttgcgcaggcagtctcttcgccccgaccacatc
aagatgtttgttttggatgaagctgacgaaatgctctctagaggtttcaaggatcagatt
tatgatatattccagcttttgccaccaaaaatccaagtgggtgttttctctgcgactatg
ccaccagaggctcttgagattactagaaagttcatgaacaagcctgtgagaattctcgtg
aagcgtgatgagctcactcttgaaggtattaagcagttttatgtcaatgtcgataaggaa
gagtggaagcttgaaacactatgtgatctttacgagaccttggccatcacccagagcgtc
atctttgttaacactaggcgaaaggttgactggctcactgataaaatgcgtggacgtgac
cacacagtatctgcaactcacggagacatggatcagaacacaagagatatcatcatgagg
gagttccgatctggatcatctcgtgtgcttatcacaaccgatctccttgctcgtggtatt
gatgtccaacaagtctcccttgttattaactatgacctgccaactcaaccagaaaactac
ctgcatcgtattggtcgtagtggacgatttggaaggaagggtgttgctatcaactttgtc
accaaggatgacgaaaggatgctttttgacatacagaagttttacaacgtcgtaattgag
gagctcccagccaatgttgctgatctcctttaa
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