Solanum pennellii: 107007518
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Entry
107007518 CDS
T04130
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3 isoform X2
KO
K03265
peptide chain release factor subunit 1
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107007518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107007518
03012 Translation factors [BR:
spen03012
]
107007518
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107007518
Translation factors [BR:
spen03012
]
Eukaryotic type
Release factors
107007518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
107007518
NCBI-ProteinID:
XP_015061650
UniProt:
A0ABM1FTX2
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Position
12:4097923..4101659
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AA seq
437 aa
AA seq
DB search
MSDGQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAIETLIVWENLDITRYVLKNSGSGETVVKHLNKEQEADQSNFRD
PATNAELEVQEKLSLLEWFANEYRKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDV
RAFDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggtcaggagagcgataagaacattgagatatggaagattaagaaacttatc
aaggcacttgaagctgctagaggcaatggcaccagtatgatttcacttatcatgcctcca
cgtgatcaggtatctcgtgttaccaagatgcttggagatgagtttggaactgcatcaaat
attaagagcagagtgaatcgacaatctgttcttggtgcaatcacatctgctcagcagagg
cttaaactctacaacaaggttccaccaaatgggcttgttctttacactggaacaattgtg
actgatgatgggaaagagaagaaagttactattgattttgagccattcaagcccattaat
gcatcactctatctttgtgacaacaaattccacactgaagccctgaatgaacttttggaa
tctgatgacaaatttggatttatagtgatggatgggaatgggactctttttgggacattg
agtggcaacacgcgtgaggtccttcataagtttagtgttgatttgcccaagaaacacgga
agaggaggacaatcagccttgcgttttgctcgtctccgaatggagaaacgacacaactac
gtgaggaagacagctgagcttgcaactcaattttatataaatcctgccaccagtcagccc
aatgtctccggcctgatactcgctggttctgctgacttcaaaacagagctcagtcaatct
gatatgtttgatcctcgtcttcaggctaagattctaaatgtggttgatgtttcttatgga
ggagaaaatggtttcaaccaagcaattgagctgtctgctgagatcttagcgaatgtgaag
tttatacaagagaagaaattgataggcaagtactttgaggagattagtcaggacactggg
aaatacgtctttggagtggatgatacattaaaagttctggaaatgggtgctattgagaca
cttattgtgtgggaaaatctggatattactaggtatgtgctgaaaaatagcggttctgga
gaaacagttgtcaaacacttgaacaaggagcaggaggctgatcagagtaacttccgtgat
cctgctacaaatgcagaactagaggttcaggaaaaattgtcactgctcgagtggtttgct
aatgagtacaggaaatttggttgtagtctggaatttgtcaccaacaagtcacaagaggga
tctcagttttgtcgaggttttggtggtattggaggactcctccgttatcagcttgatgtt
cgagcttttgatgagctttctgatgatggtgaagtttacgaagactctgactag
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