Solanum pennellii: 107011196
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Entry
107011196 CDS
T04130
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107011196
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107011196
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107011196
NCBI-ProteinID:
XP_015066082
UniProt:
A0ABM1G502
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All DBs
Position
2:54191436..54193437
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AA seq
446 aa
AA seq
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MGGTKLVYLSLLLFSTFLVINGHIGEFDEVWRRRAQEADEWAIKAYKPDPINVTLAFAKE
TGQALKEIKEAKLAINGTRRELKGGGKKYDGPCSVTNPIDRCWRCQPDWADNRKRLADCA
MGFAKGTTGGKAGEIYVVTDSSDDTSDPKPGTLRYGVIQKEPLWIIFAKSMTIRLHQELI
VQSDKTIDGRGVNVHIANGAGFMLQYVKNVIIHGLRIHDIVVGSGGMIRDAMDHVGQRTQ
SDGDGISIFGSSNIWVDHVSMWSCYDGLVDAIEGSTAVTISNSHFTDHNEVMLFGASDSS
SIDQRMQITVAYNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTIISQGNR
FIAPPDMFKKEVTKREYSPESVWKQWSWRSQGDLFMNGAFFVESGDPDWTQKHIQLFDGV
VSASGDQVTWITRFSGALNCKPGEAC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaacaaagctggtatatttgtctctgttactattttccacatttttggtaata
aatggtcacattggtgagtttgatgaggtgtggaggaggagagcccaggaagcagatgaa
tgggccataaaggcttacaagcccgaccccatcaatgtcacccttgcatttgctaaggaa
actggacaggccttgaaggaaataaaggaagcgaagctggcaataaatggaacaaggagg
gaattaaaaggaggcggcaaaaaatacgatgggccttgctcagttaccaacccaattgat
aggtgctggagatgccaacctgattgggccgacaatcgcaaaaggttagctgattgtgca
atgggctttgcaaaagggactaccggaggaaaagccggcgaaatctacgtcgtcacggat
tcttccgacgacactagcgaccctaagccgggaaccctccgttatggtgtcattcaaaag
gagccattatggatcatatttgctaaaagtatgaccattaggctacaccaggaactcata
gtgcaaagtgataagaccattgacggccgtggagttaatgttcacattgctaatggagca
ggtttcatgctccagtacgtgaagaacgtgatcatccacggtctccgcattcatgatatt
gtggtgggcagtggtgggatgatcagagatgcaatggaccacgttggacaacggacacag
agtgacggagatggtatttctatatttggttcatcgaatatatgggtggatcatgtctca
atgtggagttgttatgatgggcttgttgatgctattgagggatccactgctgttaccata
tcgaatagtcatttcactgatcataatgaggtgatgctttttggtgcgagtgacagttct
tcaattgatcaaaggatgcaaattaccgtggcttataatcattttgggaagagattgata
cagagaatgccaaggtgcagatggggttttattcatgtggttaacaatgactacacacat
tggaatatgtatgctattggcggtagccaacatcccactattattagtcaaggtaatcgt
ttcattgctcctcctgacatgttcaagaaagaggtaacaaagagggaatattccccagaa
tcagtgtggaaacaatggtcatggagatcacaaggtgatctattcatgaatggagcattc
tttgttgaatctggagatccagattggacccagaaacacatacagctttttgatggggtt
gtatcagcctcaggggatcaagtcacttggattacaagattttcaggggcactaaattgc
aagccaggagaagcttgttag
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