Solanum pennellii: 107015488
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Entry
107015488 CDS
T04130
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107015488
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107015488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF4143
Motif
Other DBs
NCBI-GeneID:
107015488
NCBI-ProteinID:
XP_027771529
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Position
3:complement(856030..860999)
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AA seq
526 aa
AA seq
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MENSRSCKSCQKHTIGSDDTTGNPVCLSCGTLQDYDNYDAQIGGISGPTGTQVRTGTAGS
GTVYNYNETKIYNAQKEIEDLMYQLGFSSLKSSEVKDMVVKVTDGEYGQGRWFTVLIGAC
ACIVMRIDGKPLAIVTVANIVCCDIYELGRMIYRVVDFLDLKLPEFDIVDSFEHYIRNAP
SFSEVSEDLIGRMLKQGVFLVQCLVKWYVTTGRRPLPVVAAVLVFVAQLNQVVVVIEDVA
NELQVAVVTCRLRYKELLERLVKVARGLPWGEDVTVKNIMKHATFVIQYMELKSMSKNRN
KNKNFEDVGFDLDYLIDDCLSNGNDYALDADDTVNDSQYFTMDHSKRLSIEGPNRFQISQ
ECLAMIYSKMKDEMHVHESTHSKDNSIRKRKRGYGMLSYTDWWKGESEMSKKLLVKQIVE
KDVGLSVMPPSFDSGCLAYERRKEKIKAAKYRIHKTMYPSDASSIDTIDVGSLEHVNAGK
RRKRKMKCDVDWEDFIIETLLLHQVEEVEIEKGYYKTLMDLHVFNY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctcgttcctgcaagagttgtcaaaagcatacaatcggttcagatgacaca
acaggtaatcccgtttgtttatcatgtggaactttacaagattacgataattacgatgcc
caaatcggtggaattagtggtccaaccggaacacaagtccgcaccggcaccgccggtagc
ggaacagtttataactacaacgaaacaaaaatttacaatgcccagaaagaaatcgaagat
ttaatgtaccaattaggattttcgagcttgaaatctagtgaagttaaggatatggtagtg
aaagttaccgacggagaatacgggcagggtagatggtttacagtattaataggtgcttgt
gcttgtattgtaatgaggatagatgggaagccgttggctattgttacggtagcgaatata
gtttgttgtgatatttatgaattgggtaggatgatttatcgggttgttgattttcttgat
ttgaagttgcctgaatttgatattgttgattcgttcgagcattatattaggaatgctccg
agctttagtgaggtttctgaggatttgattgggaggatgttgaaacagggtgtttttttg
gtgcagtgtttggtgaagtggtatgtgacgacgggaaggaggccgttgcctgttgtggca
gcagtattggtgtttgttgcgcagttgaatcaagttgttgtggtgattgaagatgtggcg
aatgagttgcaagtggcagttgttacttgtaggttgaggtataaggagttgttggaaagg
cttgtgaaggttgctcgaggtttgccttggggtgaggatgttacggttaagaatattatg
aagcatgcgactttcgttattcaatacatggagttaaagtcaatgtcgaagaatagaaat
aaaaataagaattttgaggatgttgggtttgatctggattatttgatcgatgattgtttg
agcaacggaaatgactatgctttagatgccgatgacaccgtaaatgactcgcagtacttt
acgatggatcactctaaaaggttgagtattgaaggtccaaatagattccaaatttcccaa
gagtgtttggcaatgatttattcgaagatgaaggatgaaatgcatgtacacgagtcgaca
catagcaaagataatagcattaggaaaagaaagagaggatatggcatgctttcatacaca
gattggtggaagggcgaatcagaaatgagcaaaaagcttttagtgaagcaaatagtggag
aaagatgtgggcttaagtgttatgcctccttcttttgatagtggttgcttggcatatgaa
aggagaaaagagaagataaaagctgcaaagtatcgaatccataagacaatgtatccttcg
gatgctagttcaattgatacgattgatgtaggctccctcgaacacgtaaatgctggaaag
agaaggaaaaggaaaatgaaatgtgatgttgattgggaggatttcattattgaaaccctt
ctgcttcatcaggtggaagaagtggagatagaaaagggatattacaagaccctgatggac
ttgcatgttttcaactattga
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