Solanum pennellii: 107023444
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Entry
107023444 CDS
T04130
Name
(RefSeq) NPL4-like protein 2
KO
K14015
nuclear protein localization protein 4
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107023444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107023444
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107023444
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
ubiquitin
JAB
Motif
Other DBs
NCBI-GeneID:
107023444
NCBI-ProteinID:
XP_015079623
UniProt:
A0ABM1VCX1
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Position
6:complement(60584455..60588856)
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AA seq
411 aa
AA seq
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MMIRIRSRDGLERVTIDNPHATIAQLKSQIESQLRVPVQSQTLSSNQNLLLAKTPDDWSR
FTDMDNPHTPISSFNLTHGSILYLAYQGERTIPGPTVQPAGSFGRKMTMDDLIAKQMRVT
RQENPHCELVSFDRDAANAFQHYVNETLAFAVKRGGFMYGTVSPEGKVEVHFIYEPPQQG
TEENLLLLRDPDEEKLVDAIAIGLGMRKVGFIFTQTISQDKKDYTMSTAEVLQAAELHSE
GDLKEWVTAIVKLEVNDDGAADVHFEAFQMSDMCVRLFKEGWFETDVKDEIDPKLSKMKK
DVVVGVKDTREVDNDFFLVVVKIVDHQGPLSSSFPIENRIIPVSMNALKDHFNRTKSLSF
VKRISDFHLLLLLAKFLDINADVPALAECVLTQSAVPEGYKLLIESMASAS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagaatcagaagcagagatgggttagagcgagtcacaattgacaacccacat
gccacaattgcccaactcaagtcccaaatcgaatcccaacttcgagttccagttcaatcg
caaaccctatcttccaatcagaaccttttgctcgctaaaaccccagatgattggtctcgc
ttcactgatatggacaaccctcatacacccatctcctctttcaaccttactcacggttct
atcctttatcttgcttaccagggtgagcgcaccattcccggtcccaccgtccagcccgcc
ggttcattcggtagaaagatgaccatggacgacctaattgctaaacaaatgcgagttact
agacaagagaaccctcactgcgaactcgtttccttcgatcgtgatgccgccaatgccttt
caacattatgtcaatgaaacactcgcctttgctgtcaaaaggggtggttttatgtatggt
acagtatcccctgaaggcaaagtggaagtccattttatttatgagccgccccagcaaggg
accgaggaaaatttgttgcttctacgcgatcctgatgaggagaaattggtggatgctata
gctattggattagggatgaggaaagtagggtttatatttactcagacaattagtcaggat
aaaaaggattacactatgtcaactgcagaagtcttacaggcagctgagttacattcggag
ggtgatttgaaggaatgggtgaccgctatagtgaagcttgaggtgaatgacgatggcgct
gccgatgtacattttgaggcttttcagatgagtgatatgtgtgttagattgttcaaggaa
ggctggtttgagactgatgttaaggatgagattgatccaaagctttccaagatgaagaaa
gatgtggtggtaggagtcaaggacacaagagaagttgataacgacttcttcttggttgtt
gtcaagattgtggatcaccagggtccactttcttcatcatttcccattgaaaacaggatt
attccagtgagcatgaatgcattgaaggaccatttcaatcgaacaaagagtctttctttt
gtgaagcgaatctcagatttccatctgctactgttgctggcgaagtttctggacattaat
gcagatgttcctgcattggcagaatgtgtgcttacacagtcagctgtcccagaaggttac
aagctccttatagaatcgatggctagtgcctcttaa
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