Solanum pennellii: 107026081
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Entry
107026081 CDS
T04130
Name
(RefSeq) isoamylase 1, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
spen
Solanum pennellii
Pathway
spen00500
Starch and sucrose metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107026081
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
107026081
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
PapC_C
GHL10
Motif
Other DBs
NCBI-GeneID:
107026081
NCBI-ProteinID:
XP_015082414
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Position
7:complement(5195931..5212546)
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AA seq
787 aa
AA seq
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MELLHSPSIYTYNPKLNFQNHLFSRRNSKPVDFETIRRKSVVNAAVHRVAAKTAASAVVV
EKSTTERCRFEVLSGKPLPFGATATDGGVNFAVFSRNATAATLCLITLSDLPEKRVTEQI
FLDPLANKTGDVWHVFLKGDFENMLYGYKFDGKFCPEEGHYFDSSQIVLDPYAKAIVSRG
EYGVLGPEDDCWPPMAGMVPSASDQFDWEGDLPLKFPQRDLVIYEMHVRGFTNHESSETK
YPGTYLGVVEKLDHLKELGVNCIELMPCHEFNELEYYSYNSVLGDYKFNFWGYSTVNFFS
PMGRYSSAGLSNCGLGAINEFKYLVKEAHKRGIEVIMDVVFNHTAEGNENGPILSFRGID
NSVFYTLAPKGEFYNYSGCGNTFNCNNPIVRQFIVDCLRYWVTEMHVDGFRFDLASILTR
SSSSWNAVNVYGNSIDGDVITTGTPLTSPPLIDMISNDPILRGVKLIAEAWDCGGLYQVG
MFPHWGIWSEWNGKYRDMVRQFIKGTDGFSGAFAECLCGSPNLYQKGGRKPWNSINFVCA
HDGFTLADLVTYNNKHNLANGEDNKDGENHNNSWNCGEEGEFASIFVKKLRKRQMRNFFL
CLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKDESSSDFLRFCSLMTKFR
HECESLGLDGFPTAERLQWHGHTPRTPDWSETSRFVAFTLVDKVKGELYIAFNASHLPVT
ITLPERPGYLWQPLVDTGKPAPFDFLTDDVPERDTAAKQYSHFLDANQYPMLSYSSIILL
LSSADDA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagttacttcattctccttccatttatacctacaaccctaaactcaatttccaaaac
catcttttctccaggagaaacagtaaacctgtagattttgagactattcggagaaaatca
gtggttaatgctgctgttcatagagttgcggcgaagactgcggcgagtgcggtggtggtg
gagaaatccacgacggaacgatgtcgttttgaggttttatcagggaagccattgccgttt
ggtgctactgcgacagatggtggtgtgaatttcgctgttttttcgaggaatgctactgct
gctactctttgcttgatcactctttccgatttacctgaaaagagagtgaccgagcaaatt
ttcctggatcctctagctaataaaactggagatgtatggcatgtgttccttaagggagat
tttgagaatatgctatatggctacaaatttgatgggaaattctgtcctgaagaaggacac
tactttgactcttcgcagatagtgttggatccttatgccaaggctatagtaagcagagga
gaatatggtgtattagggccagaggatgattgttggcccccaatggctggcatggtacct
tctgcttctgatcagtttgattgggaaggagatctaccactgaagtttcctcagagagat
ctggtaatctatgaaatgcatgttcgtggatttacaaatcatgagtcgagtgaaacaaaa
tatcctggtacttaccttggtgttgtggagaaacttgatcacttgaaggaacttggtgtc
aactgtatagagctaatgccctgtcacgagttcaatgagctggagtactatagttataac
tctgtattgggcgactacaagtttaacttttggggatattctactgtcaatttcttttct
ccaatgggaagatactcatctgctggtctaagtaattgtggcctgggtgcaataaacgaa
tttaagtatcttgtcaaggaagcacataaacgtggaatcgaggttatcatggatgttgtt
ttcaatcacactgctgaaggaaatgaaaatggtcccatactatcatttagaggcattgac
aacagtgtgttttatacgctagctcctaagggtgaattttacaactactcaggatgtgga
aataccttcaactgtaataatcccattgtacgtcaatttatagtggattgcttgagatat
tgggttaccgaaatgcacgtagatggcttccgctttgatcttgcttctatccttacaaga
agtagcagctcgtggaatgctgtaaatgtctatggaaattcaattgacggtgatgtgatc
accacaggcactcctctcacaagcccaccattgattgatatgattagcaatgatccaata
cttcgtggagtaaagctaatagctgaagcatgggattgtggaggcctttaccaagttggc
atgtttccgcactggggtatctggtcggagtggaacggaaagtaccgtgacatggtacgg
cagttcatcaaaggcactgatgggttttctggggcttttgctgaatgcctttgtggaagc
ccaaatctataccagaaaggaggaagaaaaccatggaacagtataaatttcgtgtgtgcc
cacgatggttttactttggctgatttagtgacatacaacaataaacacaatttggcaaat
ggagaggacaacaaagacggggagaatcacaataatagttggaattgtggcgaggaagga
gagtttgcaagtatctttgtgaagaaattgaggaaaagacaaatgcggaacttcttcctc
tgccttatggtttcccaaggtgttcccatgatatatatgggagatgaatatggtcacact
aagggaggaaacaacaacacttattgccatgataattatattaattacttccgttgggat
aagaaggatgaatcttcatctgattttttgagattttgcagcctcatgaccaaattccgc
catgaatgtgaatcactgggattggatggtttccctacagcagaaaggctgcaatggcat
ggtcacactcctagaactccagattggtctgaaacaagtcgattcgttgcatttacactg
gtcgacaaagtgaagggagaactatatattgccttcaacgccagccatttgcctgtaacg
attacacttccagaaaggcctggttatctatggcagccgttggtggacacaggcaaacca
gcaccatttgacttcttgacagacgacgttcctgagagagacacagcagccaaacaatat
tctcattttcttgacgcgaaccagtatccgatgctcagttattcatcgattattctttta
ctatcatctgctgatgatgcatag
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