KEGG   Solanum pennellii: 107029447
Entry
107029447         CDS       T04130                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
spen  Solanum pennellii
Pathway
spen03250  Viral life cycle - HIV-1
spen04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107029447
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107029447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spen04131]
    107029447
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107029447
Membrane trafficking [BR:spen04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    107029447
Exosome [BR:spen04147]
 Exosomal proteins
  Proteins found in most exosomes
   107029447
SSDB
Motif
Pfam: UEV Vps23_core
Other DBs
NCBI-GeneID: 107029447
NCBI-ProteinID: XP_015086349
LinkDB
Position
9:complement(2740810..2746816)
AA seq 404 aa
MTPPTPAAAIHSPSSPQYTQQFLSNVLSQRGPSSLPYSEDVKWLIRQHLVSLIDTCPSLQ
PRTATFTYNDGRTVNLLQANGTVPMVYLDATYNIPVIIWLLESYPRQSPLVFVNPTRNMV
IKDSHPFVNSSGIVSIPYLTNWVYPSSNLVELARNLSHFFSRDPPLYTKRNPNPSPNPHP
PPGTSFSNSGSTRPAIPPRLYPPSPYGSGSGGVVGRKMDDPSEVDKKNAIDELMLKLHSD
IEGLGKARESDMEGLFNAQGVLRRREEELRKGVKEMLDEKEGLEQQLQMVLMNADVLEGW
VRDNETKVKKIGNVDVDEAFELCDRLSKQMLDCTASDLAMEDVIYSLDKAIQDGAIPFDQ
YLRNVRLLSREQFIHRATASKVKAVQMQAQVSHMASRLSQYTLS
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgacgccaccaacgccggcggcggcgattcattctccgtcatctccccaatacactcaa
caattcttaagcaacgttctctcccaacgaggtccttcttctctcccttactccgaagac
gtaaaatggctaatccgtcaacacctcgtttcgttgatcgacacgtgtccttctcttcaa
cctagaaccgctactttcacttacaacgacggcagaactgtgaatctccttcaggcgaac
ggcacagttccgatggtctatctagatgcaacctacaacattccggtcattatttggtta
ctggaatcttaccctcgtcaatcgccgttggtattcgtgaacccaacgcgtaatatggtc
atcaaagactcacatccttttgtgaactcttctggtattgtttcaatcccttatttaaca
aattgggtatatccaagttcgaatcttgttgaattagctcgtaatttgagtcattttttt
agccgtgatccccctttgtacaccaaacggaacccgaatccgagcccaaacccgcatcct
cctccgggtactagtttttcgaatagtgggtcgactcgtccagcgataccacctcggttg
tatccaccatcaccttatgggagtgggagtggtggggtagtggggaggaaaatggatgat
ccgtcggaggtggataagaaaaatgcaatagatgagcttatgctgaaattgcatagtgat
attgaagggttggggaaggcgagggagtcggatatggaagggttgtttaatgcacaagga
gtgttgaggcgtcgtgaggaggagttgaggaaaggtgttaaggaaatgctggatgaaaag
gaggggttagagcagcaattacagatggttttgatgaatgctgatgtgttggaagggtgg
gttagagataacgaaacgaaagttaagaaaatagggaatgtggatgtggacgaagcgttt
gagctttgtgatagactttcgaaacagatgttggattgtacagcttcggatttggctatg
gaggatgtgatttattcgttggataaagctatacaagatggggcaattccttttgatcag
tacttgaggaatgtaaggttgttgtcgcgtgaacaattcattcatcgtgccacggcttca
aaggttaaggctgttcagatgcaggctcaagtttctcatatggcttctaggctgtctcaa
tatactttgtcatag

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