Solanum pennellii: 107031823
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Entry
107031823 CDS
T04130
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107031823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107031823
03036 Chromosome and associated proteins [BR:
spen03036
]
107031823
Spliceosome [BR:
spen03041
]
Complex B
Other components
Prp19-related factors
107031823
Complex C
107031823
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107031823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_CcmH_CycH
HAT_Syf1_M
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
107031823
NCBI-ProteinID:
XP_015088787
UniProt:
A0ABM1HQ92
LinkDB
All DBs
Position
10:complement(80392768..80395022)
Genome browser
AA seq
671 aa
AA seq
DB search
MASVAMRVKNKTPAPIHITAEQILREARERQESEITLPKQKITDPTEVTDYRLRKRKEFE
GLISRTSWNKSVWVKYAEWEESQKDLKRARSIWERALRVDVLNRDHTIWLKYVDMEMKNK
FVNHARNLWDRAVIHLPRVDQLWYKYIHMEEMVGNVAVARQIFERWMGWMPDQQGWLSYI
KFELRYNEIERAREIFERFVECHPEVSVWIRFSKFEMKNGETGRARNCFERAVDKLADDD
EEAEQLFMAFAEFEDKCKETDRARCIYKFALDQIPKGRAEDLYSKFVAFEKRYGDRESIE
DAIVGKRRFQYEDQVKMNPRNYDTWFDYIRLEESVGNKERIREVYERAIAHVPPAEEKRY
WQRYIYLWINYALYEEIDAQDMERTRHVYRECLKLIPHHKFSFAKIWLLAALFEIRQLRL
KEARLLLGEAIGRAPKDKIFKKYIEIELQFGNIDRCRKLYEKYLEWSPENCHAWSKFAGL
ERSLYETERARAVFELAINQPALDIPELLWKAYIDFEISEGEFERTRALYERLLNRTKHL
KVWISYAKFEALAMDSDVEQKKKCLQNARNVFERAISYLRISAPELKTERGILLEEWLNM
ENSFGEFGDVNSVHAKLPKKLRKRRQIETENGPAVYEEYIDYLFPEEMQANNLNILVSAY
KWKKQRVASED
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtagctatgcgggtgaagaacaaaaccccagctccaatccatatcacggca
gagcagattctccgggaagctagagaacgtcaagagtcggaaatcacactgcccaaacag
aaaatcactgatccaacagaagtaactgattaccgccttcgcaagcggaaggaatttgag
ggtttaattagccgtacaagctggaacaagagtgtgtgggtgaaatatgcggaatgggaa
gaatcacaaaaggatttgaagcgtgctcgttctatatgggaacgtgcacttagagttgat
gtacttaatcgtgaccatactatctggttgaagtatgtggatatggagatgaagaataag
tttgttaatcatgctcgtaatctatgggatcgagctgttattcatttgcctagggttgat
cagttgtggtacaagtatattcatatggaagagatggttggcaatgtagctgttgcaaga
cagatttttgagagatggatggggtggatgccggaccaacaagggtggttatcttatatc
aagtttgagttaaggtataatgaaatagaaagagcaagagaaatttttgagagatttgtg
gagtgtcatccggaagttagtgtttggattaggttttcaaaatttgagatgaagaatggg
gagactgggagggcaaggaattgttttgaaagggctgtggataagttggcagatgatgat
gaggaagctgagcagttgtttatggcgttcgcagagtttgaggacaagtgtaaggaaacg
gatagggcaaggtgcatatataaatttgcacttgatcagataccaaaagggcgagctgag
gatttgtacagcaagtttgtggcatttgaaaagcggtatggtgatagggaaagtattgag
gatgctatagttggaaaaaggaggtttcagtatgaggatcaagtcaagatgaatccacgt
aactatgatacgtggtttgattatattcgtctagaagagagtgttggaaataaagagagg
attagagaggtttatgagagagcgattgctcatgttcctcctgctgaagagaagcggtat
tggcaacgatacatttacttatggattaattatgcattatatgaagagatagatgcacaa
gacatggaaagaactagacatgtttatcgggagtgtcttaagctgattccgcatcacaag
ttttcatttgcaaagatttggttgttggctgcgctgtttgagattcggcagttgagactc
aaggaggcacggcttctacttggagaagcgattggaagagctcctaaagacaagatattt
aagaagtacattgagatagagctgcaatttgggaacatagatcgttgcagaaagctttat
gagaagtacttagaatggtcaccagaaaattgccatgcttggagcaaattcgcggggtta
gagaggtccttgtatgaaacggagagagccagagctgtttttgagcttgcaattaatcaa
cctgcattggatattccagagttactatggaaggcttacattgactttgagatctctgaa
ggtgaatttgaaagaacaagagcactatatgaaagacttcttaaccgcaccaaacattta
aaggtgtggataagttatgccaagtttgaagctttggctatggattcagacgttgaacag
aaaaagaagtgtctgcaaaatgctagaaatgttttcgagagggccatttcttacttgaga
atatctgcaccagaactgaaaacagaaagaggaattcttctggaagaatggctaaacatg
gaaaacagttttggtgagtttggagatgtcaattcagtccatgccaaactaccaaagaaa
ctgaggaagagaaggcaaatagagacggagaatggtccagcagtctacgaggagtacata
gactatcttttccctgaagaaatgcaggcaaacaatcttaacattttggtttctgcttat
aaatggaagaagcagcgggttgcatccgaggattag
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