Streptococcus pyogenes Manfredo (serotype M5): SpyM50081
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Entry
SpyM50081 CDS
T00497
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spf
Streptococcus pyogenes Manfredo (serotype M5)
Pathway
spf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SpyM50081 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spf03021
]
SpyM50081 (rpoB)
03400 DNA repair and recombination proteins [BR:
spf03400
]
SpyM50081 (rpoB)
Enzymes [BR:
spf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SpyM50081 (rpoB)
Transcription machinery [BR:
spf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SpyM50081 (rpoB)
DNA repair and recombination proteins [BR:
spf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SpyM50081 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CAM29423
UniProt:
A2RC51
LinkDB
All DBs
Position
95969..99535
Genome browser
AA seq
1188 aa
AA seq
DB search
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFEDVLPISNFTD
TMELEFVGYEFKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLV
DAETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPID
PDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRATGRVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHNGKVVFSDAEKVEIRRQDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDIMHVDDLEKAREKQAQETQEVSETTDEK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcgatacggaaaacaccgtacacgtcgtagcttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaattcaaactgactcattccaagatttt
ctcgattcaggtttgaaagaagtatttgaagatgtacttcctatttcaaactttacggat
actatggaacttgaatttgttggttacgaattcaaagaaccaaaatacacccttgaagag
gctcgtatccacgatgcaagttactctgcaccaatctttgtgaccttccgcttggtcaat
aaagaaactggtgaaatcaagacacaagaagttttcttcggtgacttccctatcatgacg
gaaatgggtacttttatcatcaatggtggtgaacgtatcatcgtttctcagttggtgcgt
tctccaggtgtttatttcaacgataaagttgataaaaacggtaaagttggttatggatca
acagtgattcctaaccgtggggcttggttggaattagagactgactcaaaagacattgcc
tacactcgtattgaccgtacccgtaagattccattcacaaccttggttcgtgcccttggt
ttctcaggtgatgatgaaattgttgatatctttggtgaaagcgaccttgttcgtaatacc
attgaaaaagacattcacaaaaatccaagtgattctcgtacagacgaagcccttaaagaa
atttacgagcgtcttcgtccaggtgagccaaaaactgcagatagctctcgtagtctattg
attgcacgtttctttgatgctcgtcgttacgatttggctgcggttggtcgttacaaagtg
aacaaaaaacttaatatcaagactcgtcttttgaaccaaatcattgctgaaaaccttgtg
gatgctgaaactggcgaaattttggtagaagctggaactgagatgactcgtagcgtcatc
gaatccatcgaagaacaccttgacggtgatttgaacaagtttgtttacacaccaaatgat
tacgctgtggttactgaacctgttgttcttcaaaagttcaaggttgtgtcaccaattgat
cctgatcgtgtagtaactattgttggtaatgccaatccagatgataaggttcgtgcattg
acacctgctgatattttggcagaaatgtcatacttcttgaaccttgctgaaggtcttgga
aaagttgacgatattgaccacttaggtaaccgtcgtatccgtgccgttggtgaattgctt
gccaaccaattccgcatcggccttgctcgtatggagcgtaacgtgcgtgagcgtatgtct
gttcaagacaacgatgtgttaacaccacaacaaatcatcaatatccgtcctgtcacagca
gctgttaaagaattcttcggttcgtctcagttgtcacagttcatggaccaacacaaccca
ttgtcagagttgtctcacaaacgtcgtttatctgccttaggacctggtggtttgacacgt
gaccgtgctggttatgaggttcgtgacgtgcattacacgcactatggccgtatgtgtccg
attgaaacacctgaaggaccaaacattggattgattaacaacttgtcttcatttggacat
cttaataaatatggtttcattcaaacaccttaccgtaaggttgaccgtgcgactggtagg
gtaactaacgagattgtttggttgactgccgacgaagaagacgaatacacagttgcacag
gccaattcgaaactaaacgaagatggcacttttgctgaagaaatcgttatgggtcgtcac
caaggtaataaccaagaattttctgcaagtgttgttgatttcgttgacgtttcccctaaa
caggtagttgctgttgcgacggcatgtattcctttcttggaaaatgatgactccaaccgt
gctctcatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggaatatcaagctgcccatgactcaggcgctgcggtgattgct
cagcacaatggtaaagttgtcttttctgatgctgaaaaagtggaaatccgtcgtcaagat
ggctcacttgatgtttaccacattaccaaattccgtcgttcaaactcaggaacagcctat
aaccaacgcactcttgttaaagtaggagacatcgttgaaaaaggtgatttcatcgctgat
gggccttctatggaaaatggtgaaatggcccttggacaaaacccagtcgttgcttacatg
acttgggaaggttacaacttcgaggacgctgttatcatgagtgagcgccttgtgaaagaa
gatgtctacacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaaactt
ggccctgaagaaatcactcgggaaatcccaaatgttggtgaagaagccctcaaagacctt
gacgaaatgggcattatccgtatcggtgctgaggtgaaagaaggcgacatcttagtaggt
aaagtcacacctaaaggtgaaaaagacctttctgctgaagaacgtttacttcacgccatc
tttggggataaatcgcgtgaagtgcgtgatacctcacttcgtgtccctcacggtggtgat
ggtatcgttcgtgatgtgaaaatctttacacgcgctaacggcgatgaattgcaatcaggt
gttaatatgcttgtgcgtgtttacatcgctcaaaaacgtaaaatcaaggtcggagataaa
atggccggtcgtcacggaaacaagggtgtcgtttcacgtattgtaccagttgaagacatg
ccataccttccagacggaacaccagttgacatcatgttgaaccctcttggggtgccatca
cggatgaatattggtcaggttatggaacttcaccttggtatggctgctcgtaatcttggc
attcacattgcaacacctgtctttgacggggcttcatcagaagacctttgggacactgtt
cgcgaagctggtatggatagcgatgctaagacggtcctttatgatggtcgcaccggtgaa
ccatttgacaaccgtgtatccgttggtgtcatgtatatgatcaaacttcaccacatggtt
gatgataaacttcatgcccgttctgtaggaccatactcacttgttacccaacagccactt
ggtggtaaagctcaatttggtggacaacgttttggtgagatggaggtttgggcccttgaa
gcttatggtgcatcaaatgttcttcaagaaatcttgacctacaagtcagatgacgtcaca
ggacgtttgaaagcctatgaagcgattactaaaggtaaaccaattccaaaaccaggtgta
ccagaatccttccgtgttcttgtaaaagaattgcaatcgcttggtcttgatatgcgtgtg
cttgacgaggatgataatgaagtggaacttcgtgatcttgatgaaggtgaagacgatgac
attatgcatgttgacgatctcgagaaggcacgtgaaaaacaagctcaagaaacccaagaa
gtttctgaaacaactgacgaaaaataa
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