Sphingopyxis sp. FD7: SPYCA_0035
Help
Entry
SPYCA_0035 CDS
T10393
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPYCA_0035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spfd03400
]
SPYCA_0035
Enzymes [BR:
spfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SPYCA_0035
DNA repair and recombination proteins [BR:
spfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPYCA_0035
Prokaryotic type
SPYCA_0035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBB10777
LinkDB
All DBs
Position
37981..38685
Genome browser
AA seq
234 aa
AA seq
DB search
MAEVKLHPDWIARIGGEFAQPYMAALKQFLADERAKGKTIYPRPRDWFAALDATPPGQVR
VVILGQDPYHGPGQAHGLCFSVQPGVRVPPSLVNIYKELRSDLGIAPAPHGHLAHWARQG
VLLLNNCLTVEAGQPASHQGKGWEKFTDAAVAAVAADRAPKVFILWGSHAQKKAANVPGL
GAGSPHLILRAPHPSPLSAHNGFFGSRPFSQANAFLEAQGRGAIDWRLPDSPDA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcaaactgcatcccgactggatcgcccgcatcggcggcgagtttgcgcag
ccctatatggcggcgctcaagcaattccttgccgacgagcgcgccaagggcaagaccatc
tatccgcgaccgcgcgactggttcgcggcgctcgacgcgacgccgccggggcaggtgcgc
gtcgtgatcctgggccaagacccctatcacgggccggggcaggcgcatgggctttgtttc
tccgttcagcccggcgtgcgcgtgccaccgagcctcgtcaacatctataaggaattgcgc
agcgatctgggcatcgcgcccgcgccgcacggccatctggcgcattgggcgcggcagggc
gtgctgctgctcaacaattgcctgacggtcgaggcgggacagccggcgtcgcatcagggc
aaggggtgggagaagttcaccgacgccgcggtcgccgcggtcgccgccgatcgggcgccc
aaggtgttcatcctgtggggcagccatgcgcagaagaaggcggcaaatgtgccggggctg
ggggcgggaagcccgcacctgatcctgcgcgcgccgcacccctcgccgctgtcggcgcac
aacggctttttcgggtcgcggccgttcagccaggccaatgccttcctcgaggcgcagggt
cgcggcgcgatcgactggcgcttgcccgacagtcccgacgcatga
DBGET
integrated database retrieval system
