Rhizorhabdus wittichii DC-6: HY78_02225
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Entry
HY78_02225 CDS
T05200
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00220
Arginine biosynthesis
sphd00250
Alanine, aspartate and glutamate metabolism
sphd00430
Taurine and hypotaurine metabolism
sphd00910
Nitrogen metabolism
sphd01100
Metabolic pathways
sphd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
HY78_02225
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HY78_02225
00220 Arginine biosynthesis
HY78_02225
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
HY78_02225
Enzymes [BR:
sphd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
HY78_02225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT3
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
ARR52356
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All DBs
Position
452731..457392
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AA seq
1553 aa
AA seq
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MDTETARRTASDKHEFTDIFAKALTSGALPGELAGLDGEPLEKAAAFLAHTARRRQPGHA
AIAVQTIAGNVGGSRLMRIAVVNDDMPFLVDSVSAALATQGVEVRRLLHPVIAVRRDEDG
ALTAVLPQGSTGERRESFIYLEAERVDARERQALAQAIEAVLEDVRAAVRDWQAMQIAMR
DDAEGLPDGEGAALLRWLLDQNLTLLGHHVAMAKGEPRDRLGILRVGSRKLWRDSTAKAA
IAWFEKGGAAPLLLKSDCRSTVHRRAPLDLIVTPVRQGKDVTGLSIHAGLWTSAALRTPA
EDIPVLRSRLTAIEERLGFDPKGHAGKALHHALSELPPDLVLALPIDSLEKVVLTAMSLV
DRPRPRLELVRSTLGEHLVAIVWLPRELLTTGRRVAIGEMLAQASGATLSNWSLQLGEGD
IAQIRYMLDLPAGGTVPDNEPLDRRLSEMLRGWEPAVEAQLAEMEAGNRAVRLTLDYAAA
FPIAYRTHSTPAEAATDILRLNALGDGAARGCRLYRGEHDPDHRLRLKIYRRGALIPLSE
AVPVLENFGFRVIEEIPTPLDGGAIGYIHEFKLDLPDADTASRLIEHSAVAEESIAATLE
GRAENDLFNELIVSVGLSPDEALLFRAWFRYLRQTGFAYGLATAVEALKKAPDVARGIIA
YFRALHHPTRNDAAEAERLHAEIETGLKKVTAIDDDRMLRRFRAVVRATLRTNAFSPAAK
EALAFKIDSSGVPGLPAPVPWREIWVYSPRVEGIHLRGGPIARGGLRWSDRRDDFRTEIL
GLMKAQVVKNAVIVPTGAKGGFYPKQLPSPSDRDAWLAEGTESYRVFIRSLLSVTDNIVE
GKVAHPPKVAIRDGDDPYFVVAADKGTATFSDVANAIAVERGFWLGDAFASGGSHGYDHK
AMGITARGAWVSVQRHFAEMGVDVQNDPVRVVGCGDMSGDVFGNGMLLSKSIRLVAAFDH
RHIFLDPDPDAATGWEERNRLFALPRSSWADYDAKLISKGGGIFPRDQKEIPISPQIREA
LDIADEVLDPSALIAAILRSPVDLLWFGGIGTYVKAKSETNAEVGDRSNEAHRVNGEDVR
ARVVGEGANLGVTQAGRIAFAMKGGRINADFIDNSAGVDCSDNEVNIKIALNREMLEGRL
EFDKRNALLVKMTDDVAHIVLEDNRLQTLALSLAERGGAEAMPAQLRVIEILEENGRINR
AVDGFDSNDMLLRRAQEHLGLTRPELAVVLSHGKLALQDAIENSDRTGDPMLAPLLLAAF
PPAMQKGFADAIEAHRLRPQILATKMSNRVINRLGLVAPFEMAEEEGCSLAQVATAYFTV
DALFGLEALFMRIEQAAIGEQARLTLLAALAEIARGHVADLLRSIAAETDIGTMVAMLKP
GLARLDDARADLIRSEARQQSDQLRQRITAEDVDPALIDAVVEIAEIDGAIGTAALASEL
SADEVDVTRAYVVLGEALGLDWAKAAAARFRSADAWERLLIAGLTREFGQIRLDFLARHG
GKGPGEAVTAWLEAHRDRAEQFRQTVGRARSAAAPTAAMLAQIAAQARSLLMR
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggataccgagacggccaggcgcacggcttcggacaagcacgaattcaccgacatcttc
gccaaggccctgaccagcggcgcccttccgggcgaacttgccggcctcgacggcgaaccc
ctcgaaaaggcagcggccttcctggcccacaccgcgcggcggcgacagcccggccatgcc
gcgatcgcggtgcagacgatcgcgggcaatgtcggcggcagccggctgatgcggatcgcc
gtcgtcaacgacgacatgcccttcctggtcgactcggtctccgccgcgctcgccacgcag
ggcgtcgaggtccgtcgcctgctccaccccgtcatcgcggtccgccgcgacgaggatggc
gcgctcaccgccgtgctgccgcagggatcgaccggcgagcggcgcgaatccttcatctat
ctcgaagccgagcgggtcgacgcccgcgaacggcaggcgctcgcccaggcgatcgaggcg
gtgctcgaagacgtccgcgccgcggtgcgcgactggcaggcgatgcagatcgcgatgcgc
gacgacgccgagggactgcccgacggcgagggagcggcgctgctgcgctggctgctcgac
cagaacctcaccctgctcggccatcacgtcgccatggcgaagggcgagccgcgcgaccgg
ctcggcatcctccgcgtcggcagccgcaagctgtggcgcgattccaccgcgaaggcggcg
atcgcctggttcgagaagggcggcgcggcgccgctgctgctcaagtccgattgccgatcg
accgtccaccgccgcgcgccgctcgacctgatcgtcaccccggtgcggcagggcaaggac
gtcaccggcctgtcgatccatgccggcctgtggaccagcgccgcgctgcgcaccccggcc
gaggacatcccggtgctgcgcagccgcctcaccgcgatcgaggaacggctcggcttcgac
ccgaagggccatgccggcaaggcgctgcaccatgcgctgtcggaactgccgcccgatctc
gtcctggcgctgccgatcgactcgctggagaaggtggtgctgaccgcgatgtcgctggtc
gatcgcccgcgcccgcggctcgaactggtgcgcagcacgctgggcgagcatctggtcgcg
atcgtctggctgccgcgcgagttgctgaccaccggccgccgcgtcgcgatcggcgagatg
ctggcccaggcgtcgggcgcgaccctgtccaactggtcgctccaactcggcgagggcgac
atcgcccagatccgctacatgctcgacctgccggccggcggcacggtgcccgacaacgag
ccgctcgaccggcggctgtccgagatgctgcgcggctgggagcctgcggtcgaggcgcag
ctcgccgagatggaagcgggcaaccgcgcggtgcggctgacgctcgactatgccgccgcc
ttcccgatcgcctaccgcacccattcgaccccggccgaggccgcgaccgatatcctgcgg
ctcaacgcgctgggcgacggcgcggcgcgcggctgccgcctctatcgcggcgagcatgat
cccgaccatcgcctgcggctgaagatctatcggcgcggcgcgctgatcccgctgtccgag
gcggtgccggtgctggagaatttcggcttccgcgtgatcgaggagatcccgaccccgctc
gacggcggcgcgatcggctatatccacgagttcaagctcgacctgcccgatgccgatacc
gccagccggctgatcgagcatagcgcggtcgccgaggagtcgatcgccgcgaccctcgaa
gggcgcgccgagaacgacctgttcaacgagttgatcgtctcggtcggcctgtcgccggac
gaggcgctgctgttccgcgcctggttccgctacctgcgccagaccggcttcgcctatggc
ctcgccaccgccgtcgaggcgctcaagaaggcgccggacgtcgcgcgcggcatcatcgcc
tatttccgcgcgctgcatcacccgacccgcaacgacgcggccgaggcggagcgcctccat
gccgagatcgagaccggcctgaagaaggtgacggcgatcgacgacgatcgcatgctgcgc
cgcttccgcgccgtcgtccgcgcgacgctgcgcaccaacgccttctcccccgccgccaag
gaagcgctcgccttcaagatcgattcgagcggcgttcccggcctccccgcgccggtgccg
tggcgcgagatctgggtctacagcccgcgcgtcgagggcatccacctgcgcggcgggccg
atcgcgcgcggcggcctgcgctggtccgaccggcgcgacgacttccgcaccgagatcctc
ggcctgatgaaggcgcaggtcgtcaagaacgcggtgatcgtgccgaccggcgcgaagggc
ggcttctacccgaagcagctcccctccccgtccgatcgcgacgcctggctggcggaaggc
accgaaagctatcgcgtgttcatccgatcgctgctgtcggtcaccgacaacatcgtcgag
ggcaaggtcgcccatccgcccaaggtggcgatccgcgacggcgacgatccctatttcgtc
gtcgccgccgacaagggcacggcgaccttctccgacgtcgccaacgcgatcgcggtggag
cgcggcttctggctgggcgacgccttcgccagcggcggcagccatggctatgaccacaag
gcgatgggcatcaccgcgcgcggcgcctgggtctcggtccagcgccatttcgccgagatg
ggcgtcgacgtgcagaatgatccggtccgcgtcgtcggctgcggcgatatgtcgggcgac
gtgttcggcaacggcatgctgctgtcgaagtcgatccgcctggtcgcggcgttcgaccat
cgccacatcttcctcgaccccgatcccgatgcggcgaccggctgggaggagcgcaaccgc
ctgttcgccctgccccggtcgagctgggccgattatgacgccaagctgatctcgaagggc
ggcggcatcttcccgcgcgaccagaaggagattccgatctccccgcagatccgcgaggcg
ctcgacatcgccgacgaggtgctcgatccctccgcgctgatcgcggcgatcctcaggagc
ccggtcgacctgctgtggttcggcggcatcggcacctatgtgaaggcgaagtcggagacc
aacgccgaggtcggcgaccgttcgaacgaggcgcaccgcgtgaacggcgaggacgtccgc
gcccgggtggtcggcgaaggcgccaatctgggcgtgacccaggcgggccgcatcgccttc
gcgatgaagggcggccggatcaacgctgacttcatcgacaattcggcgggcgtcgactgc
tcggacaacgaggtcaacatcaagatcgcgctcaaccgcgagatgctcgaaggccggctg
gagttcgacaagcgcaacgcgctgctcgtcaagatgaccgacgacgtcgcgcatatcgtg
ctggaggacaaccgcctgcagacgctggcgctgtcgctggccgaacgcggcggggccgag
gcgatgcccgcgcagcttcgcgtcatcgagatactggaggagaatggccgcatcaaccgc
gcggtcgacggcttcgacagcaacgacatgctgctgcgccgcgcgcaggagcatctcggc
ctgacccggcccgagctggcggtggtgctgtcgcacggcaagctggcgctgcaggacgcg
atcgagaacagcgaccgcaccggcgatccgatgctcgccccgctgctgctggcggccttt
ccgccggcgatgcagaagggcttcgccgacgcgatcgaggcgcatcgcctgcgtccgcag
atcctggcgaccaagatgtcgaaccgggtgatcaaccggctgggcctggtcgcgccgttc
gagatggccgaggaggaaggctgctcgctggcgcaggtggcgaccgcctatttcacggtc
gacgcgctgttcgggctcgaagcgctgttcatgcggatcgagcaggccgcgatcggcgag
caggcgcggctgacgttgctcgccgcactggccgaaatcgcgcgcggccatgtcgccgac
ctgctccgcagcatcgcggcggagaccgacatcggcacgatggtggcgatgctgaagccc
ggcctcgcccggctcgacgacgcccgcgccgacctgatccgcagcgaggcgcgccagcag
tccgaccagctccgccaacgcatcaccgccgaggacgtcgatcccgcgctgatcgacgcg
gtcgtcgagatcgccgagatcgacggcgcgatcggcacggccgcgctcgccagcgagctt
tcggccgacgaggtcgacgtcacccgcgcctatgtggtgctgggcgaggcgctggggctc
gactgggccaaggcggcggcggcgcgcttccgcagcgcggatgcctgggaacggctgctg
atcgcggggctgacccgcgagttcggccagatccgcctcgacttcctggcgcggcacggc
ggcaagggccccggcgaggcggtcaccgcctggctggaggcccatcgcgaccgggccgag
cagttccgccagacggtcggccgcgcccgatcggcggcggccccgaccgcggcgatgctg
gcgcagatcgcagcacaggcccgctcgctgctgatgcggtga
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