Rhizorhabdus wittichii DC-6: HY78_05285
Help
Entry
HY78_05285 CDS
T05200
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00061
Fatty acid biosynthesis
sphd00071
Fatty acid degradation
sphd01100
Metabolic pathways
sphd01212
Fatty acid metabolism
sphd02024
Quorum sensing
Module
sphd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HY78_05285
00071 Fatty acid degradation
HY78_05285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HY78_05285
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphd01004
]
HY78_05285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphd04147
]
HY78_05285
Enzymes [BR:
sphd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HY78_05285
Lipid biosynthesis proteins [BR:
sphd01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
HY78_05285
Exosome [BR:
sphd04147
]
Exosomal proteins
Exosomal proteins of breast milk
HY78_05285
Exosomal proteins of breast cancer cells
HY78_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ARR52902
LinkDB
All DBs
Position
1106998..1108713
Genome browser
AA seq
571 aa
AA seq
DB search
MTNSGTVTDPIPPGRGAAFPGGGDVPASPPIPPRLLTDLIDAAVRDHGERRAIDFLGRHW
TYAEIGALVDRAAAGLQAIGVGPGIRFGLCLPNSPYFVILYFAALRCGATIVNFNPLYVE
HELKHQIQDSGTTVMAVIDVASIHAKVAAVAEESGLRTIIVCPMADILPPLLSIAYRLFK
RGEIAAWPRDGRHVAFSTVTDGAASGGFRPVEVSPDDVAVLQYTGGTTGVPKGAMLSHAN
LTANSYQMILHVGQRPGARQDRIMGVLPMFHVFALTTVLNYSVDTAAEMILLPRFELKQF
LKTAKRTRPTKLLAVPTMLTAINKAAASQAIHFDDLDYCVSGGAPLPFDVRTEFERLTGA
RVVEGYGLSETSPILTCNPVEGAVKDNSAGPAFPGTVLEIRSLDDPHVILPTGERGEVCA
RGPQVMKGYWNKPEETEKVFVDGAIRTGDVGYLDEDGYLFLVDRIKDVIIAGGYNIYPRV
IEEALYEHPAILEAVVIGVPDAYRGQAPKAFVVLRPGQQASVDELFEFLKSRVSKIEMPR
EVEIRTSLPKTLIGKLSRKELVAEEAKKAAN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagcggcaccgtgacggaccccatcccccccggtcgcggtgccgccttcccg
ggcggcggggacgtgccagcgtccccgccgattccgccccggctgctcaccgacctgatc
gacgccgcggtgcgcgaccatggcgagcggcgggcgatcgacttcctcgggcgccactgg
acctatgccgagatcggcgcgctggtcgaccgcgcggcggccggcctccaggcgatcggc
gtcgggccgggcatccgcttcggcctgtgcctgcccaactcgccctatttcgtcatcctc
tatttcgcggcgctgcgctgcggggcgacgatcgtcaatttcaacccgctctatgtcgag
catgagctgaagcaccagatccaggattcgggcacgaccgtgatggccgtgatcgacgtc
gcctcgatccacgccaaggtcgccgccgtcgccgaggagagcgggctgcggacgatcatc
gtctgcccgatggccgatatcctgccgccgctgctgtcgatcgcctatcgcctgttcaag
cgcggcgagatcgcggcatggccgcgcgacggccggcacgtcgccttctccaccgtgacc
gacggcgccgcctccggcggcttccgcccggtcgaggtgtcgcccgacgacgtcgcggtg
ctccaatataccggcggcaccaccggcgttcccaagggcgcgatgctgagccacgccaac
ctgaccgcgaacagctaccagatgatcctccacgtcgggcagcggccgggcgcgcggcag
gaccggatcatgggcgtgctgccgatgttccacgtcttcgcgctgacgacggtgctcaac
tattcggtcgataccgcggcggagatgatcctgctgccgcgcttcgagctgaagcagttc
ctgaagaccgcgaagcgcacccggccgaccaagctgctcgcggtgccgaccatgctgacc
gcgatcaacaaggcggccgccagccaggcgatccatttcgacgatctcgactattgcgtg
tcgggcggcgcccccctgcccttcgacgtccgcaccgagttcgagcggctgaccggcgcg
cgcgtcgtcgagggctatggcctgtcggagacctcgccgatcctgacctgcaacccggtc
gagggcgcggtgaaggacaacagcgccggcccggccttccccggcaccgtgctggagatc
cgcagcctcgacgatccgcacgtcatcctgccgaccggtgagcgcggcgaggtctgcgcg
cgcgggccacaggtcatgaagggctattggaacaagcccgaggagaccgagaaggtgttc
gtcgacggcgcgatccgcaccggcgacgtcggctatctcgacgaggacggctatctgttc
ctggtcgaccggatcaaggacgtcatcatcgccggcggctacaacatctatccgcgcgtg
atcgaggaggcgctctacgagcatcccgcgatcctggaggcggtggtgatcggcgtgccc
gacgcctatcgcgggcaggcgcccaaggcgttcgtcgtgctgcgccccggccagcaggcc
agcgttgacgaactgttcgaattcctcaaaagccgagtctccaagatcgagatgccgcgc
gaggtcgaaatccgcaccagcctgcccaagacgctgatcggcaagctctccaggaaagag
cttgtcgccgaggaagccaagaaggcggcgaactga
DBGET
integrated database retrieval system
