Rhizorhabdus wittichii DC-6: HY78_11700
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Entry
HY78_11700 CDS
T05200
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HY78_11700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_11700
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HY78_11700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Peptidase_U49
Motif
Other DBs
NCBI-ProteinID:
ARR54048
LinkDB
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Position
complement(2416500..2419214)
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AA seq
904 aa
AA seq
DB search
MFARLAFGAWPGSPQVAISVRMAQTAKKDMAPPASAPTPMMAQYLALKAAAEDCLLFYRM
GDFFELFFDDAKTASACLDIALTARGEHDGQPIPMCGVPAHSAEGYLARLIKAGHRVAIA
DQTESPAEAKKRAGSKALVGRAIVRVVTAGTLTEEALLDSRAANWLVAVAGAGQGADRRI
GIAAADISTGRFEIAGLIPSALDAELARLDAAEIVVPEDFEEPPAGAVAWPREHFESVRG
EERLKRLLGVATLDGFGAFTRAELAAAGALIAYLERAGQGSLPFLQPPRRRVVADHMMID
AATRESLEITLSQAGVRKGSLLDAVDRTVTGAGARLLGADLSAPLTDVGAIEARLDLVAL
FEGDGALRERLRGALRALPDVGRALGRLVARRGSPRDLGQLRDGLDQARLLHELLGRAAP
MPALLAGLLPQLVGHDELVDLLRRALVATPPIDAAQGGYIAEGYDPALDALRGQGGEGRK
AIAALEARYRAETGIPSLKIKHNGVLGYHIEVQAKHADPLMTADSGFTHRQTLAGVVRFN
APDLHEQAMRVGQSGEHALAAEAAHLEELMAAALGRTAEIAATADALARLDVAAALAERA
AEGGWTRPHFEPHSCFDVIGGRHPVVEAAVAAQGARFVANDCRLSDQERLWLVTGPNMGG
KSTFLRQNAAIAILAQAGSPVPATSARLGIVDRLFSRVGASDNLARGRSTFMVEMVETAA
ILAQATERSFVILDEVGRGTSTYDGLAIAWAVVEAVHDINRCRCLFATHYHELTRLAERL
DALSLHHVRAREWKGELVLLHELADGPADRSYGIAVAKLAGLSPPVLARARDVLKKLEAG
RAATGGLAAGLDDLPLFAAAAQVEEAAPDPLRHEIETIDVDSLSPREALDILYRLKTLAR
EAAE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccgcctcgcttttggggcatggcccgggagtccacaagtcgctatcagcgtc
cggatggcgcaaaccgcaaaaaaggatatggccccgccggcctcggctcccaccccgatg
atggcgcaatatctggcgctgaaggcggcggccgaggactgcctgctcttctatcggatg
ggcgacttcttcgagctgttcttcgacgatgcgaagacggcctccgcctgcctcgacatc
gccctgaccgcgcgcggcgagcatgacgggcagccgatcccgatgtgcggcgtccccgcc
cattcggcggagggctatctcgcccggctgatcaaagccggccaccgcgtcgcgatcgcc
gaccagaccgagagcccggccgaggcgaagaagcgcgccggctccaaggcgctggtcggc
cgcgcgatcgtccgcgtcgtcaccgcgggaacgctgaccgaggaggcgctgctcgattcg
cgcgccgccaactggctggtcgcggtggcgggcgcggggcagggcgcggaccgccggatc
ggcatcgccgccgccgacatctcgaccggccggttcgagatcgccgggctgatcccctcc
gcgctcgacgccgaactcgcccggctcgacgccgccgagatcgtcgtccccgaggatttc
gaggagccgcccgccggcgcggtcgcctggccgcgcgagcatttcgagtcggtgcgcggc
gaggagcggctcaagcggctgctcggcgtcgcgacgctcgacggcttcggcgccttcacc
cgcgccgagctggcggcggcgggcgcgctgatcgcctatctggagcgcgccggccagggc
agcctgcccttcctgcagccgccccgccgccgcgtcgtcgccgatcacatgatgatcgac
gcggcgacccgcgagagcctggagatcacgctgagccaggccggcgtccgcaagggcagc
ctgctcgacgcggtcgaccgcaccgtgaccggcgcgggcgcgcggttgctcggcgccgac
ctgtcggccccgctgaccgacgtcggcgcgatcgaggcgcggctcgacctcgtcgcgctg
ttcgagggcgacggcgcgctgcgcgagcggctgcgcggcgcgctccgggcgctgcccgac
gtcggccgcgcgctcggccggctcgtcgcccggcgcggcagcccgcgcgacctcggccag
ctccgcgacgggctcgaccaggcgcggctgctccacgaactgctcggccgcgccgcgccg
atgccggcgctgctcgccgggctgctgccgcagctcgtcggccatgacgagctcgtcgac
ctgctccgccgcgcgctggtcgccacgccgccgatcgacgcggcgcaaggcggctatatc
gccgagggctacgacccggcgctcgacgcgctgcgcggccagggcggcgaggggcgcaag
gcgatcgccgcattggaggcgcgctaccgcgccgaaaccggcatcccgtcgctcaagatc
aagcataatggcgtgctcggctatcatatcgaggtgcaggccaagcatgccgacccgctg
atgacggcggattcgggcttcacccatcgccagacgctggccggggtggtgcgcttcaac
gcgcccgacctgcacgagcaggcgatgcgggtcggccagtcgggcgagcatgcgctggcc
gccgaggccgcgcatctggaggagctgatggccgccgcgctcggccgcaccgccgagatc
gccgcgaccgccgacgcgctcgcccggctcgacgtcgcggcggcgctcgccgagcgcgcc
gccgagggtggctggacccgcccgcatttcgagccgcacagctgcttcgacgtgatcggc
ggccgccatccggtggtcgaggcggcggtggcggcgcagggcgcgcgcttcgtcgccaat
gactgccggctgtcggatcaggagcggctgtggctcgtcaccggtccgaacatgggcggc
aagtcgaccttcctgcgccagaacgcggcgatcgcgatcctcgcccaggcgggcagcccg
gtgccggcgacgagcgcgcggctcggcatcgtcgaccggctgttcagccgggtcggcgcg
tcggacaacctggcgcgcgggcgatcgaccttcatggtcgagatggtcgagaccgcggcg
atcctggcgcaggcgaccgagcgcagcttcgtcatcctcgacgaggtcgggcgcggcacc
tccacctatgacggcctcgccatcgcctgggcggtggtcgaggcggtgcacgacatcaac
cgctgccgctgcctgttcgcgacccattatcacgagctgacccggctggccgagcggctc
gacgcgctgtcgctccaccatgtccgcgcgcgcgagtggaagggcgagctggtgctgctg
cacgagctggccgacggcccggccgaccgcagctacggcatcgccgtcgccaagctggcg
gggttgtcgccgccggtgctggcccgcgcccgcgacgtgctcaagaagctcgaggccgga
cgcgccgcgaccggcgggctcgccgccgggctcgacgacctgccgctgttcgccgccgcc
gcgcaggtcgaggaggccgcgcccgatccgctgcgccacgagatcgagacgatcgacgtc
gactcgctctccccgcgcgaggcgctcgacatcctctaccggctcaagacgctggcgcgg
gaagcggcggaatag
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