KEGG   Sphingomonas sp. FARSPH: DM480_01160
Entry
DM480_01160       CDS       T05685                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
sphf  Sphingomonas sp. FARSPH
Pathway
sphf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM480_01160 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphf02044]
    DM480_01160 (gspD)
Secretion system [BR:sphf02044]
 Type II secretion system
  General secretion pathway protein
   DM480_01160 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AXJ94306
LinkDB
Position
complement(229497..231749)
AA seq 750 aa
MKTAFLASAALLLAGLSLPVGALAQTTLNVRDADIRAFIADAARVTGRTFIIDNRVQGKV
TVVTDRPLSKSEYFEAVLSTLRANGLVAVPTGNGALRVQPIDNAAAQPSRIGLTGANRNS
LVTEIVRLRSIDAAQAIETVRPLVSAQGSVSANRGANSLVIVDFADNIRRVREVLRRVDA
DNATSRVVSLKNASAKEIAAALQGLAGTGGGGQGGGVPGGGAGLSVVAVDSANSVIIRGD
ATSVARLAAIAADLDQKAKNGTEIKVVFLENADAAQLLPVLQQLVGQAPDQPQATQLTRA
GSGLSANGGAGGSRGGNTSLSQPVMAQAPVSAGGGGGGGGGGTGQPAITTQGGRTAAVVT
RFQGANAIVIAAPADIQRQLSEVVRQLDTRREQVVIEGIVAEVSDATVNRLGAQFILANP
SGGAFAASTFSNSAPNILQIAGAIGARELGKNTTTTIANGVTTTVTTNTGASDQLTQSAI
SSIIGSSGGFGGFGGKVGDVIFGAIINAVKSDTTSNLLQVPHLVTLDNQEAYSLVGQEIP
ITTGQALSNNFDNTFRTTQRENVGIELTARPQVNSSGSIKLNLRLEVSSIAGPVSNDNSD
LILNKRQIETTLTVDDGQIAVMGGLLSDEERRTIEKIPLLGDIPVLGNLFKSKAKSRNKT
NLMIFIRPTILRTPEDSRKLAEQRYGYLRLQQGLQTPGQEPTIDELVRDYMGAAPPIPSA
PVPGNIEDPRVAVPVQTSVSQRTIRPGKRR
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgaagactgcctttctcgcctccgccgccctgctgctggccggactgtccctgcccgtg
ggcgcgctggcgcaaaccacgctcaacgtgcgcgatgcggacatccgcgcattcatcgcc
gacgccgcgcgcgtcaccgggcgcacgttcatcatcgacaaccgggtgcagggaaaggtg
accgtcgtcaccgaccggccgctcagcaagtcggaatatttcgaggcggtgctgtcgacg
ctgcgtgccaatgggctggtcgcggtgccgacgggcaatggcgcgctgcgcgtgcagccg
atcgacaatgccgcggcgcagcccagtcggatcggcctgaccggtgccaaccgcaacagc
ctggtgaccgagatcgtgcggctgcgctcgatcgatgcggcgcaggcgatcgagacggtg
cgcccgctggtcagcgcgcaagggtcggtcagcgccaatcgcggcgcgaacagcctggtg
atcgtcgatttcgccgacaacatccgccgcgtgcgcgaggtgctgcgccgcgtggatgcg
gacaatgcgacgtcgcgcgtcgtctccctgaagaatgcgagcgcgaaggagatcgccgcg
gcattgcaggggcttgcgggcaccggcggcggggggcagggcggcggcgtgccgggcggc
ggtgccggcctgtcggtcgtcgcggtcgacagcgcgaacagcgtcatcatccgcggcgat
gcgaccagcgtcgcgcgcctcgccgcgatcgccgccgacctcgaccagaaggcgaagaac
ggcaccgagatcaaggtggtgttcctggagaacgccgatgcggcgcaattgctgcccgtg
ctgcagcagctcgtcggccaggcgccggaccagccgcaggcgacgcagctgacccgtgcg
ggatcggggctgagcgccaatggcggggccggcggcagccgcggcggcaatacgtcgctg
tcgcagccggtgatggcgcaggcgccggtgagtgccgggggcggcggcggtggcggcggt
ggcggcaccggccagcccgcgatcacgacgcagggcgggcgcaccgccgcggtcgtcaca
cgcttccagggtgcgaacgcgatcgtcatcgccgcgcccgccgatatccagcggcaattg
tcggaagtggtgcgccagctcgacacgcggcgcgagcaggtggtgatcgaggggatcgtc
gccgaagtctccgacgcgacggtcaaccggctgggcgcgcagttcatcctggccaacccg
tcgggcggcgcgttcgcggcgtcgaccttctccaactccgcgcccaacatcctgcagatc
gcgggtgcgatcggcgcgcgcgagctgggcaagaacacgacgacgacgatcgcgaacggc
gtgacgacgaccgtcaccaccaataccggcgcgtccgaccagctgacgcagagcgcgatc
agttcgatcatcggatcgtcgggcgggttcggcgggttcggcggcaaggtcggcgacgtc
atcttcggcgcgatcatcaacgcggtgaagagcgacacgacatcgaacctgctccaggtc
ccccatctcgtcacgctcgacaaccaggaagcgtacagcctggtcgggcaggagattccg
atcacgacgggacaggcgctgtcgaacaatttcgacaacaccttccgcacgacgcagcgg
gagaatgtcggcatcgagctgaccgcgcggccgcaggtcaattcgtcggggtcgatcaag
ctcaacctgcgcctcgaggtcagctcgatcgcggggccggtgtcgaacgacaacagcgac
ctcatcctcaacaagcgccagatcgagacgacgctgaccgtcgacgacggccagatcgcg
gtgatgggcggcctgttgagcgacgaggaacggcgcacgatcgagaagatcccgctactc
ggcgacatccccgtgctcggcaatctgttcaagtcgaaggcgaagtcgcgcaacaagacc
aatttgatgatcttcatccggccgacgatcttgagaacgcccgaggacagccgcaagctc
gccgagcagcgctacggctatctgcggttgcagcaggggttgcagacgccggggcaggag
ccgacgatcgacgaactggtccgcgattatatgggggcggcgccgccgatcccctccgcg
ccggtgccgggcaatatcgaggacccgcgcgtcgcggtgccggtgcagacgagcgtgtcg
cagcggacgatccggccggggaagcggcggtga

DBGET integrated database retrieval system