Sphingorhabdus sp. M41: AZE99_01810
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Entry
AZE99_01810 CDS
T04317
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AZE99_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphg03021
]
AZE99_01810
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_01810
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AZE99_01810
Transcription machinery [BR:
sphg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AZE99_01810
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AZE99_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
MSSS
B
Motif
Other DBs
NCBI-ProteinID:
AMO70756
LinkDB
All DBs
Position
complement(373457..377854)
Genome browser
AA seq
1465 aa
AA seq
DB search
MATQAASVKTTAPTPTRKKRIRKIFGDIHEVIEMPNLIEVQRESYEQFLRSDPSIGYVSG
LEKTLRSVFPIRDFAGTAEMDFVNYQLEDPKYNVEECRQRGITYAAPMKVTLRLIVFEVD
PETEARSVLDIKEQDVYMGDMPLMTKNGTFVINGTERVIVSQMHRSPGVLFDHDRGKTHS
SGKFLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLRSLGDAILEVKEKKPD
FKAGEMVRVGGMKQPAEILEIDGNLITIREPMGAIEFNGGKIEDEGRTKSAEIVKIVKQG
YSEEDILNLFYERIVYKRAKDGWTIPFVAEQWRGIKPTFDIVDAQSGEVVFEAATKITPR
AAKKAESDGMQNIVIPTEEIFGRYSAFDLINEKTGEIYIEAGDEVTAENLEKIDNAGIDA
LELLDIDHVTTGPWIRNTLKVDKAEDRDGALSDIYRVMRPGEPPTRETAEALFEGLFFDP
ERYDLSAVGRVKLNMRLELDAPADYTILRKEDILAVVKTLVDLKDGKGEVDDIDNLGNRR
VRSVGELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVATVREFFGSSQLS
QFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLI
NSLASFSRVNQYGFIETPYRKVVDNKVTDDVVYLSAMEEQKHTVAQANADLTEDGSFVEE
IVSSRQAGEFLMAPRDIITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPL
VKAEAPFVGTGMEETVARDSGAAIAARRAGIVDQVDATRIVIRASGAVEAGRSGVDIYTL
QKFQRSNQNTCINQRPLVKVGEIVQQGDTIADGPSTDMGELALGKNSLVAFMPWNGYNYE
DSILISERIVKDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYI
GAEIEPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRV
FNRHGIDKDERALAIEREEIARFTKDRDDERAILNRATFNTLKDMLIGQTATSAPKPMKK
GASITEESLSELEQVDWWKIAVKDDQVQSDFEATRQQYDEAIKLINERFEDRREKLERGD
ELAPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPQEDMPFLEDGTPVDIVLNP
LGVPSRMNVGQIFETHLGWAARGLGQQVTEALEEWKLANPDPQAAPPPDAVKERLKVIYG
EQYHEDIDSRDTAEIVEMVGHLRHGVPMGTPVFDGAHEGDISDMLELAGLDRSGQVNLYD
GRTGDKFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALQAYGAAYTLQEMLTVKSDDVIGRTKVYEAIVKGDDTFEAGVPESFNVLVKEMRSLG
LNIQLSSFGDEDEEGDDDGIAIAAE
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggctacccaagcagcttcggtcaaaacgacggctccgacccccacccgcaagaaacgc
attcgcaagatcttcggcgatattcacgaagtcatcgagatgccgaatctcatcgaggtt
cagcgcgaatcatatgaacagtttctgcgctcggatccctcgatcggatatgtctccggc
ctcgaaaaaacgctgcgcagcgttttcccgatccgcgattttgccggcaccgccgaaatg
gacttcgtcaactatcagctcgaagatcccaaatataatgttgaagaatgccgtcagcgg
ggcatcacctatgccgcgccgatgaaggttacccttcgcctgatcgtgttcgaggtcgac
cccgaaacggaagcgcgctcggttctcgatattaaagagcaagacgtttacatgggcgac
atgcccttgatgaccaagaacggcacgttcgtcatcaacggcacagagcgcgttattgtc
agccagatgcaccgttcgcccggtgtcctgtttgaccatgaccgcggcaagacccactcg
tccggtaaattcctcttcgccgcccgcgtcattccttaccgcggcagctggctcgacttt
gaatttgacgcaaaagacatcgtcaacgtccgtattgaccgcaagcgcaagctgccagtg
accgcattgctgcgttcgctcggcgatgccattcttgaagtcaaagaaaagaagcctgat
ttcaaggccggtgaaatggttcgtgtcggcggcatgaagcagcctgccgaaattctcgaa
atcgacggcaatctgatcaccatccgcgaaccgatgggcgcgatcgagtttaacggcggc
aagatcgaagacgaagggcgcaccaagagcgccgaaatcgtcaagatcgtcaagcagggc
tattcggaagaagatatcctcaacctgttctacgaacgcatcgtttacaagcgcgccaaa
gacggctggaccattcctttcgtagccgagcaatggcgcggaattaagccaacttttgat
atcgttgacgcacagagcggcgaagtcgtttttgaagcagccaccaagatcacgcctcgc
gccgcgaaaaaggctgaatccgatggcatgcaaaacatcgtcatcccgaccgaggaaatt
tttggtcgctacagcgcctttgacctgatcaacgagaaaaccggcgagatttacatcgaa
gccggtgacgaagtgaccgcagaaaatctcgagaagattgacaatgcgggcatcgatgcg
ctcgaactgctcgacatcgaccatgtcacaaccggtccctggatccgcaacacgctgaag
gtcgacaaggccgaagaccgtgatggcgcgctttccgacatctaccgtgtcatgcgccct
ggtgaaccaccaacgcgcgaaaccgcagaagccttgttcgaaggcctgttcttcgaccca
gaacgctatgaccttagcgccgtgggccgcgtaaaactcaacatgcgcctcgaactggat
gcgccggctgattacacaatcctgcgcaaggaagacattctcgctgttgtcaaaaccctc
gtcgatctgaaagatggcaagggcgaagtcgatgatatcgacaacctcggcaaccgccgt
gtccgttctgttggcgagctgctggaaaaccagtatcgcgtcggccttctccgcatggag
cgcgccgtcaaggagcgcatgagcagcgtcgacgtatccaccgtgatgccgaacgacctg
atcaatgcgaagcctgcggttgcgaccgttcgtgaattcttcggctcctcgcagctgtcg
cagttcatggatcagaccaacccgctttcggaagtcacccataaacgtcgcgtatcagca
ttgggccccggtggtctgacccgtgaacgtgccggctttgaagtccgcgacgttcacccg
acccattatggccgtatctgcccgattgaaacgcctgaaggcccgaacatcggtctgatc
aactcgctggcatccttcagccgcgtcaatcaatatggcttcatcgaaacgccatatcgg
aaagtcgtggacaataaagtgactgacgatgtggtctatctctccgccatggaagagcag
aagcatactgtcgctcaggcgaacgccgacctcaccgaagacggcagctttgtcgaggaa
atcgtttcctctcgtcaggctggcgaattcctgatggcgccacgcgacatcattaccctg
atggacgtcagcccgaaacagctggtgtcggttgctgcctcgctcattccattcctggaa
aatgatgacgccaaccgcgcgctcatgggatcgaacatgcaacgtcaggctgtgccgctg
gtgaaagccgaagcaccgtttgtcggcaccggcatggaagaaaccgtggcccgcgactct
ggtgctgcgattgctgcgcgacgcgccggtatcgtcgatcaggtggatgccacccgcatc
gtcatccgcgcttcgggtgctgtcgaagccggacggtccggtgtggacatttacacgctg
cagaaattccagcggtccaaccagaatacctgcatcaaccagcgtccgctggtgaaggtt
ggtgaaattgttcagcagggcgatacgattgctgacggtccatccaccgatatgggcgaa
ttggcgctgggcaagaacagcctcgtcgccttcatgccctggaatggctacaactacgag
gatagtattctcatctccgaacggatcgtgaaagacgacgtcttcacatcgatccatatc
gaagaatttgaagtcatggcccgcgacaccaagctcggacctgaagatatcacccgcgac
attccaaacgtcggcgaggaagccctgcgcaacctcgacgaagccggcattgtctatatt
ggtgcggaaatcgagccgggcgatattctcgtcggcaagatcacgcccaagggtgaatcg
ccaatgacgccggaagaaaaacttctccgcgccatcttcggtgaaaaagcatctgacgtt
cgcgatacctccttgcgtctgcctcccggcgttgccggtacggttgtcgaggttcgtgtg
ttcaaccgtcacggcatcgacaaagacgaacgcgcactggcgatcgaacgcgaagaaatt
gcacgttttacgaaggatcgcgacgacgaacgcgccattctgaaccgcgcaactttcaat
acgctgaaagacatgctgatcggccagaccgcgacttccgcgccgaagcctatgaaaaag
ggcgcatcgatcaccgaagaaagcctgtccgaactggaacaggtcgactggtggaagatt
gcggtcaaggacgatcaggttcagtccgatttcgaagccacgcgtcaacaatatgacgaa
gcgatcaagctgatcaacgaacggttcgaagaccgtcgtgagaagctggaacgtggcgac
gagctcgcaccgggcgtgctgaagatggtcaaggtctttgttgcggtgaagcgcaagctg
caaccaggcgacaaaatggctggccgtcacggcaacaagggggttatctcccggattctg
ccgcaggaagacatgccgttcctcgaagatggtactccggttgacatcgtgctcaaccct
ctcggtgtgccttcgcgaatgaacgtcggacagattttcgaaacccacttgggctgggcc
gcacgtggtcttggccaacaggttaccgaagctctcgaagagtggaaattggctaacccc
gatccacaggcagcaccgccaccagacgcagtcaaggaacggctcaaggttatctacggc
gaacaatatcatgaagatatcgatagccgcgataccgccgagatcgtcgaaatggttggc
catttgcgtcacggtgtcccgatgggaaccccggtatttgacggtgcgcatgaaggcgat
atttccgacatgctggaactagcaggtctggatcgcagcggtcaggtcaatctttatgat
ggccggaccggtgacaagttcgatcgcaaggtgacagtgggctatatttacatgctcaaa
ctgcaccatctggtcgacgacaagatccatgcgcgttcgattggcccctacagccttgtc
acgcagcagcctctcggcggtaaagcccagtttggcggacagcgtttcggggaaatggaa
gtctgggcactgcaggcttacggcgcggcttacacgctgcaggaaatgctgacggtcaag
tccgatgacgtaatcggccggaccaaggtttacgaagcaatcgtcaagggagacgatacg
ttcgaggccggcgttccggaaagctttaacgttctggtcaaggaaatgcggtcgcttggc
ctcaacatccagctctccagcttcggtgacgaagatgaagaaggggatgatgacggtatt
gcgatagcggcggaatga
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integrated database retrieval system
