Sphingomonas hengshuiensis: TS85_20525
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Entry
TS85_20525 CDS
T03848
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TS85_20525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_20525
Enzymes [BR:
sphi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TS85_20525
DNA repair and recombination proteins [BR:
sphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TS85_20525
Prokaryotic type
TS85_20525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5995
Motif
Other DBs
NCBI-ProteinID:
AJP73669
UniProt:
A0A7U4JBA9
LinkDB
All DBs
Position
complement(4493952..4494662)
Genome browser
AA seq
236 aa
AA seq
DB search
MAEPKLHPSWLEPLRAEFASPYMAALRAYLKAEKAAGKRIFPASHNWFRALDLTPLEDVR
VVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIFKEMESDLGIPRAAHGFLEHWAKQG
VLLLNAVLTVEQGMAASHQKRGWEPFTDAVIRLVNARPEPVVFLLWGSHAQKKAAFVDST
DRGGRHLVLRAPHPSPLSAHSGFFGSRPFSQANSFLKAQGLRPIDWALPALHGEPA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgaaactgcacccgagctggctggagccgctgcgcgccgagtttgcgagc
ccctatatggcggcgctgcgtgcgtatctgaaggcggagaaggcggcggggaagcggatc
tttcccgcgtcccacaactggttccgcgcgctcgacctcacgccgctggaggacgtccgc
gtcgtgatcctcgggcaggatccctatcatggcgaggggcaggcgcatgggctgtgcttc
tcggtccagccgggggtgcggaccccgccgagcctggtcaatatcttcaaggagatggag
tcggacctcggcatcccgcgtgccgcccacgggttcctcgaacattgggcgaagcagggc
gtgctgctgctcaacgcggtgctcaccgtcgagcagggcatggccgcatcgcaccagaag
cgcggatgggagccattcaccgacgccgtgatccggctggtcaacgcccggcccgagccg
gtggtgttcctgctatggggcagccatgcccagaaaaaggcggcgttcgtcgattcgacc
gatcgcggcgggcggcatctggtgctcagggcgccgcacccctcgccgctgtcggcgcat
tcggggtttttcggatcgcgccctttttcgcaggcgaatagcttcctgaaggcgcaggga
ctaaggccgatcgactgggccttgcccgcactccatggagaacccgcctga
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