KEGG   Sphingorhabdus lutea: LPB140_08250
Entry
LPB140_08250      CDS       T04602                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sphl  Sphingorhabdus lutea
Pathway
sphl02024  Quorum sensing
sphl03060  Protein export
sphl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LPB140_08250
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LPB140_08250
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LPB140_08250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphl02044]
    LPB140_08250
Enzymes [BR:sphl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LPB140_08250
Secretion system [BR:sphl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LPB140_08250
  Eukaryotic Sec-SRP protein
   LPB140_08250
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_33 AAA_22 Zeta_toxin DnaB_C AAA_19 AAA_30 cobW ABC_tran Thymidylate_kin ResIII APS_kinase TctA AAA_31 AAA_16 AAA_14 AAA_7 AAA AAA_17 AAA_5 NB-ARC NACHT AAA_24 6PF2K KTI12 DO-GTPase1 AAA_28 MMR_HSR1 ArsA_ATPase
Other DBs
NCBI-ProteinID: APG62779
UniProt: A0A1L3JCG1
LinkDB
Position
complement(1744532..1745995)
AA seq 487 aa
MFDKLSDRLGGVFDRLRGRGALNEQDVLLAMREVRVALLEADVALPVVKEFVDGVTQLAI
GQQVLKSVAPGQQVVKIVNDALISILGGETSGLNLAVTPPAVIMMVGLQGSGKTTTTAKI
AKRLKEKERKKVMMASLDVNRPAAQEQLEILGKQIDVATLPIVAGQLPVDIAKRAMQAAK
LQAFDVLLLDTAGRLHVDTALMAEMKAIAEIGKPQETLLVVDSLTGQDAVNVAKNFSDEV
NLTGIVLTRMDGDARGGAALSMRTVTGQPIKFAGVGEKMDALEEFNPERVAGRILGMGDV
VGLVERASEIIQKDDADKLAAKMAKGQFDMDDLRSQLNQMTKMGGLGALAGMMPGMKKAK
AAMAASGMDDKILLRMDAIISSMTKKERAKPELLNAKRKIRVANGSGTTVQEVNKVMKMH
KEMSGAMKKIKKMGGLKGLAAMFGKGGMPDLGGPSAGGPAMPGGLPGFGGPAGGLPPELA
KLMNKKH
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtttgataagttgagcgataggttaggcggggtctttgaccgtttgcgtggccgtggt
gcgcttaatgaacaagatgtgctgttggcgatgcgcgaagtgcgtgttgctttgctggag
gcggacgtcgccttgccagttgtaaaagaatttgttgatggtgtgacccagcttgccatt
ggtcaacaggttttaaagtcagttgcgccgggccaacaggttgtcaaaattgtaaatgat
gccttgatttccattttgggcggcgaaaccagtgggcttaatcttgctgtaacgccccct
gctgttattatgatggtgggtttgcaggggtcgggtaaaaccacgacgacggcaaaaatt
gctaagcgcttaaaagaaaaagagcgtaaaaaggtaatgatggcgtctttggacgttaac
cgccctgccgcgcaagagcagctggagatattgggcaagcaaattgatgtggcgactttg
cccattgtggcgggtcagcttcctgttgatattgcaaagcgggcaatgcaggccgcaaag
ttacaggcttttgacgttttgcttcttgatacggcgggccgtttgcatgtcgataccgca
ttgatggcggagatgaaggcgattgccgaaattggcaagccgcaggaaactttgctggtt
gtggatagcttaaccggccaagatgcggtgaatgtcgccaaaaacttctctgatgaagtg
aatttaaccggtattgtgttgacccgtatggacggtgatgcgcgtggcggtgcagcattg
tcgatgcgtacagtgactggacagccgattaaatttgccggcgttggcgaaaaaatggac
gcgttagaggagtttaatccagaacgtgttgcgggccgcatattgggtatgggcgatgtt
gtcggcctggttgagcgagcaagcgaaatcatccaaaaggatgatgccgataaattggcg
gccaaaatggccaagggtcaatttgatatggacgatcttcgttcgcaattgaaccaaatg
accaaaatgggcggccttggtgctttggcgggtatgatgcccggcatgaaaaaggcaaag
gcggccatggcggcaagcggcatggatgataaaatcttgctgcgtatggatgcgattatc
agttctatgaccaaaaaagaacgcgctaagccagaattattaaacgcaaagcgtaaaatc
cgcgttgccaatggttcggggaccacggtgcaagaggttaacaaggttatgaaaatgcac
aaggaaatgtccggtgcaatgaaaaagattaagaaaatgggcgggttaaaaggacttgct
gccatgtttggtaagggcggaatgccagatttgggcggtccttcggctggcggtccggca
atgcccggtggtcttcccggatttggtgggccagcaggcggcctgcccccggaattagca
aaattaatgaacaaaaagcattaa

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