Sphingobium sp. RAC03: BSY17_50
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Entry
BSY17_50 CDS
T04461
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY17_50 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_50 (xth)
Enzymes [BR:
sphr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSY17_50 (xth)
DNA repair and recombination proteins [BR:
sphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSY17_50 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AOF98380
UniProt:
A0A1B3MZ66
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All DBs
Position
complement(53620..54441)
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AA seq
273 aa
AA seq
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MKVATYNVNGINGRLPVLLRWLGKAEPDIVCLQELKAPQDKFPEKAIRDAGYEAVWHGQS
RWNGVAILSRVGDIYETRRGLPGDPDDTQSRYIEAAVAGVLVAGLYLPNGNPRPGPKFDF
KLRWFERLHDHLASLVDLDAPVVVAGDFNLMPTDLDVYAPERWRDDALFAPEVREAYRHV
LDQGWSDALREMHPDETIYTFWKYWRGAFERNAGLRIDHILLNAKARGRLERAQVDTAPR
GWEKTSDHAPVWIELADKPVRKARQSRAANQSA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagcgacttataatgtgaacggaattaacgggcgcttgcccgtcctgctacga
tggctgggcaaagccgagcccgacatcgtttgcctccaggaattgaaggcaccacaagat
aaatttccagaaaaggcaattcgcgacgcaggctatgaagcagtctggcacgggcaaagc
cgttggaacggcgttgcgatcctgagccgtgtcggtgatatctatgagacgcgccgcggg
ctgcctggcgatccggacgatacgcaaagccgctacatcgaggcggcggttgccggggtt
ctggtggctggtctttatctacccaacggcaatccacgccctggacccaagttcgacttc
aaattgcgctggttcgagcggcttcatgatcaccttgcctcgctcgtcgatctcgatgcg
ccggtggtggtcgccggggacttcaacctgatgccgacggatctggatgtctatgcgccc
gagcgatggcgagacgatgcgctcttcgcgccggaggtgagggaagcctatcgccatgta
ctggaccagggatggagcgacgctctgcgcgaaatgcaccccgatgagaccatctacacc
ttctggaaatattggcgcggggcattcgagcgcaacgcaggccttcggatcgaccatatt
ctgctcaacgcaaaggcacggggcaggcttgaacgggcgcaggtcgatacagcgccgcgc
ggatgggaaaagacgagcgaccatgctccggtttggattgagctggccgacaagccggtg
cgcaaggcgcgtcaatcaagggcggcaaaccagtcagcatag
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