Sphingopyxis sp. PAMC25046: E5675_09810
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Entry
E5675_09810 CDS
T06315
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00550
Peptidoglycan biosynthesis
sphx01100
Metabolic pathways
sphx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5675_09810 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5675_09810 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphx01011
]
E5675_09810 (mrdA)
Enzymes [BR:
sphx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E5675_09810 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphx01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E5675_09810 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QCB54703
UniProt:
A0A4V1CK45
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All DBs
Position
complement(2094030..2095937)
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AA seq
635 aa
AA seq
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MPKKKSPPITEAWRGITFTRRALVVGGAQAAVGVALAARMTYISVIDNDRYVLESESNRV
NLTLIPPRRGWIVDRHGTALANNRVSLRIDLIPDRLHNKEMVLGQLQTLLQLDGDAMERI
NRDLKAASGFQPVAVKEDMTEAEYSSILVRLPELPGIAPQRGFARNYPTGAAVGHLIGYV
GAPNAEEYQKARDPLYITPGYKIGKDGLEKYFQEMLKGKPGARRVEVTARGKVVRDLSTQ
PDVQGKTVHLTIDAGLQEYVARRMGRESGAAVVIDCHNGDILAFVSMPSFDPNSFSDGIS
TSEYAWLRADDHQPLINKATRGLYPPGSTLKPMAAIAAVEHGVDPSERHTCIGGYRLGNR
FFRCLGTHGSLDMPSAIMKSCNSYFYWLAHRLGYDAMAPTARLLGLGEEFRLAGSSQRYG
TIPDSAWKMRKYDQQWSASDSLNAVIGQGYVSVNPLQLAVMTARIASGRRLYPRLINREF
QNEPLPFSPEALAVARQGMNLVVNGAGTAVRSRLPLDGITMAGKTGTAQVRGLGTGNGKS
GTWKFRDHGLFVGFAPVDNPRYATGIVIEHGMGGSRAAAPVARDFMTYLFDREKGMEALE
TLEAGWGGPIKDRMDRDYAAWKSGASSDPEPGVPQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagaagagtccgccgatcaccgaagcctggaggggcataaccttcacccgt
cgcgcgctcgtcgtcggcggggcgcaggcggcggtcggcgtcgcgctcgcggcgcgcatg
acctatatttcggtgatcgacaatgatcgctacgtcctcgaatcggaaagcaaccgcgtc
aatttgacgctgattcctccgcgccggggctggatcgtcgaccgccatggcacggcgctc
gcgaacaatcgtgtttcgctccgcatcgatctcattcccgaccgcctgcacaacaaggag
atggtgctcgggcagctccagacgctgctccagctcgacggcgatgcgatggagcggatc
aatcgcgacctcaaggcagcctcggggttccagccggtcgcggtcaaggaggacatgacc
gaggccgaatatagctcgatcctcgttcgcctgcccgaactgcccggcatcgcgccgcag
cgcggctttgcacgcaattatccgaccggcgccgcagtcggccatctgatcggctatgtc
ggcgccccgaacgccgaggaatatcagaaggccagggatccgctgtacatcacgcccggc
tacaagatcgggaaggacgggctggaaaaatatttccaggagatgctgaaaggcaaaccc
ggggcgcggcgcgtcgaggtgacggcgcgcggcaaggtcgtccgcgatctttccacccag
cccgacgtgcagggcaagaccgtccatctgacgatcgacgccggcctgcaggaatatgtc
gcgcggcgcatggggcgcgaatcgggcgcggcggtcgtcatcgactgccacaatggcgat
atcctcgccttcgtgtcgatgccgagcttcgacccgaacagcttctccgacggcatcagc
accagcgaatatgcgtggctgcgtgccgacgatcaccagccgctgatcaacaaggcaacg
cgcggcctctatccgcccggatcgacgctgaaaccgatggccgcgatcgccgcggtcgaa
catggcgtcgacccgagcgagcgccacacctgcatcggcggctaccgcctcggcaaccgc
ttcttccgctgtctcggcacccatggcagcctcgacatgccgtcggccatcatgaagagc
tgcaacagctatttctactggctcgcgcatcggcttggctatgacgcgatggcccccacc
gcccggctgctcggactcggcgaggaattccggcttgcgggcagcagtcagcgatacggc
accatacccgacagcgcgtggaagatgcggaaatacgaccagcaatggtcggcgtcggat
tcgctgaatgctgttatcggccagggatatgtcagcgtgaatccgcttcagcttgcggtc
atgaccgcgcgcattgcctcgggccgccgcctctatccgcgcctgatcaaccgcgaattc
cagaatgaacctctgcccttctcacccgaggctctcgcggttgcccgtcagggaatgaac
ctcgtcgtcaatggcgctggcactgcggtgcgcagccgcctgccactcgacggcatcacc
atggcgggcaagaccggtaccgcgcaggtgcgcgggctcggcaccggcaacggtaaaagc
ggaacgtggaaatttcgcgatcacggtctgttcgtcggtttcgcgccggtcgacaatccg
cgctatgcgaccggaatcgtgattgagcacggcatgggcggaagtcgcgccgcagcgccc
gtcgcaagggatttcatgacctatctgttcgaccgcgaaaagggaatggaggcacttgag
acacttgaggccggctggggcgggccgatcaaggatcgtatggaccgtgactatgccgca
tggaaatcgggcgcgtcgagcgaccccgaacccggagtgccgcaatga
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