Sphingopyxis sp. PAMC25046: E5675_17890
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Entry
E5675_17890 CDS
T06315
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx02010
ABC transporters
sphx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E5675_17890
03070 Bacterial secretion system
E5675_17890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_17890
02044 Secretion system [BR:
sphx02044
]
E5675_17890
Transporters [BR:
sphx02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E5675_17890
Secretion system [BR:
sphx02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
E5675_17890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_18
AAA_16
ABC_ATPase
AAA_25
ABC_membrane_3
PRK
Zeta_toxin
nSTAND3
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QCB56121
UniProt:
A0A4P7S2V2
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All DBs
Position
3817903..3820296
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AA seq
797 aa
AA seq
DB search
MASGSTICCACESRIAPLLRRPEPRRLRSPGFGRYQGPCRTIHIAHRESRAAAVGRRPGS
LWPAAPRILSTPEKPDRRRTVQQDLSLGSSEPPADSGLAAFALILAMHRIAADPVELRHD
LGHANPVTESDLLRLAKRIEGVRARATTGDFERLQRLPMPVLGGGPEGWFVIGRVGEDAV
AVQRPGAEIERWDRSALEARWSGALLLVATRDAAQVAAPAFDMTWFVPQIVKYRKLIGEV
LLITLALNLLGLAAPLFFQNVVDKVLAHNSLATLQVLSIGLVIVSLWEVAFGWLRTRLYS
ETSQKLDVELGSRLFRHLLRLPLAYFENRRVGDTVTRVRELETVREFMTNASLTVLIDPL
FTIVFLVAMWLYSPTLFLIVALTLPAYVIVSLLVTGPLRRRLDEKFARGAANNALLVESV
SGMQTLKAAAVEPQWQERWERQLAAYSAANQRVINLGNSGSQAVQLISKLSLAAILFFGA
QQVIAGALTIGGLVAFNMFAQRVSGPVIRMAQLWQDFQQVRLSVARMGDILNTGGEPGAG
SRTALPALAGHIRFENVRFRYAADGPWTLDDIDIDLPAGATIGIAGASGSGKSTLTKLLQ
RLYLPASGRVLVDGADIAQIDPAWLRRQIGVVLQENILFNRSIRENIALADPAMPIERVM
NAARLAGAHDFILALPHGYDTIVEERGVNFSGGQRQRLAIARALITNPRILILDEATSAL
DAESEEIVQRNLKAIAAGRTVLIIAHRLSAIRQCDRILTLDKGRIVESGTHDELLRLGGR
YAALHHRQIGVQAGAAA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgggtcaaccatatgctgcgcctgcgaaagccgaatcgcccctttgctccga
cgaccggagcctcggcgccttcgctcgccgggatttggccgctaccaaggaccgtgccgg
acgattcacattgctcaccgcgaaagccgcgcggcggctgtgggccggaggccgggctca
ctctggcccgccgcaccccgcatattgtcaacgcctgagaaacccgatcggagacgcacc
gtgcagcaggacctgtccctcggttcgtcggagccgcccgcggacagcgggctcgccgcc
ttcgcgctgatcctcgccatgcaccgcatcgccgccgaccccgtcgagctgcgccacgat
ctgggtcatgccaaccccgtcaccgaatccgatctgttacgcctggcaaagcgcatcgag
ggcgtccgcgcccgcgccaccaccggcgatttcgagcgattgcagcgccttcccatgccg
gtgctgggcggcgggcccgagggctggttcgtgatcggtcgcgtcggcgaggacgccgtg
gccgtccagcgccccggcgccgagatcgagcgctgggatcgcagcgcactggaggcccgc
tggtcgggcgccttgctcctcgtcgcgacgcgcgatgccgcgcaggtcgccgcgcccgcc
ttcgacatgacctggttcgtcccccagatcgtcaaatatcgaaagctgatcggcgaggtg
ctgctgatcaccctcgcactcaacctgctagggctcgcagcgccgctcttcttccagaac
gtcgtcgacaaggtgctcgcgcacaacagcctcgccaccctccaggtgctcagcatcggg
ctggtgatcgtctcgctctgggaagtcgccttcggctggctgcgcacccggctctattcg
gaaaccagccagaaactcgacgtcgagctgggcagccggctcttccgccacctgctccgc
ctgccgctcgcctatttcgagaaccgccgcgtcggcgacaccgtcacccgcgtccgcgag
ctggaaacggtgcgcgaattcatgaccaatgcctcgctcacggtgctgatcgatccgctg
ttcacgatcgtctttctcgtcgcgatgtggctctattcgccgacactcttcctcatcgtc
gcgctgacgctgcccgcctatgtgatcgtctcgctgctcgtcaccggccctttgcgccgc
cggctcgatgaaaaattcgcgcgcggcgccgcgaacaacgcgctgctcgtcgaaagcgtc
tcgggcatgcagacgctcaaggcggccgcggtcgagccgcaatggcaggagcgctgggaa
cgccagctcgccgcctacagcgccgccaaccagcgcgtgataaacctcggcaattcgggc
agtcaggcggttcagctcatctccaagctcagcctcgccgcgatcctgttcttcggcgcg
cagcaggtgatcgcgggcgcgctgacgatcggcgggctggtcgcgttcaacatgttcgcg
cagcgcgtctcgggcccggtcatccgcatggcgcagctctggcaggacttccagcaggtc
cgcctctcggtcgcgcggatgggcgacatcctcaacacgggcggcgagcccggtgccgga
tcgcggacggcgctgcccgcgctcgccggccatatccgcttcgaaaatgtccgtttccgc
tatgctgcggatggtccctggacgctcgacgacatcgacatcgacctgcccgccggcgcc
acgatcggcattgccggcgcctcgggctcgggcaagtcgacgctcaccaaattgctccag
cgtctctatctgccggcgagcggccgggtgctggtcgacggcgccgacatcgcccagatc
gaccccgcctggctgcgccgccagatcggcgtggtgctgcaggagaatatcctgttcaac
cgctcgatccgcgagaatatcgcgctcgccgaccccgccatgccgatcgagcgggtgatg
aacgccgcgcggctcgcgggcgcgcatgatttcatcctcgcgctcccgcacggatatgac
acgatcgtcgaagagcgcggcgtcaacttctcgggcggccagcgccagcgcctcgccatc
gcccgcgcgctgatcaccaatccgcgcatcctgatcctcgacgaggcgacctccgcgctc
gatgccgagagcgaggagatcgtccagcgcaatctgaaggcgatcgccgcgggccgcacc
gtgctgatcatcgcgcaccgcctttcggcgatccgccagtgcgaccgtattctgacgctc
gacaaggggcgcatcgtcgagagcggcacgcatgacgagctgctccgcctcggcgggcgc
tatgcggcgctccatcaccgccagatcggcgttcaggcgggggcggcggcatga
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