Sphingorhabdus sp. YGSMI21: CHN51_02485
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Entry
CHN51_02485 CDS
T05308
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphy02000
]
CHN51_02485
Transporters [BR:
sphy02000
]
Other transporters
Pores ion channels [TC:
1
]
CHN51_02485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
DUF7208
Motif
Other DBs
NCBI-ProteinID:
ATW05345
UniProt:
A0A2D3RHX5
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All DBs
Position
complement(537597..540506)
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AA seq
969 aa
AA seq
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MTLVAAPAFAQEAEDDQADDNVIVVSGIRGSLAKALDEKRNAESLVEVIQAEDIGKLPDQ
NLAEVLENITGVQITREAGIGTGVQIRGSNDNRIEINGVGTVGSGSGRSGINFEDINAAI
ISSLEVIKAPTAMTTEGSVGGTINLRTIRPLDLRDTLIAFRAQGEYSEQSESVQPRISGS
FGKNWDTGAGRIGIVLSGSYAKQDASSSRPRVDRDTLIPQGTSVTAAGAPGPDFDYLGIQ
FLNQEFEIFNYETYNVAGSLEWAPSDSLKLYVDGFYNKQTRRQQSTRIQGSGVSSVRNTN
VPDTFETINFGSLGGVDLGSIQAAETGTLQPNVPNEPNLRFSSDTGARLTESNLIRAGGE
WESGRFKARIEGSRTLASSRTPDLSTTLNFINPNTPITGSANDNGTPFAYDLSGGSLAFG
IDTSSPFAPTVAQLLDPNNVVLDAVSVSDNSNRNVEYTGRMDFTLDLEDLTGFLTSFNLG
YRYNDRSTEFNEITSSIGLSALADSPNGSVFSQLLVAGPSNFGKADGRSLFFGDFLIIDP
NLAYSDQAGTLATLQAALLAEPGGRVLADPSFNPASFYRITEQTHAVYGQLNFAAGIFSG
NAGLRYVDTAINSVGNNVDANGNIINQTNTPGKYRFLLPRVNLAADLTSDIVLRASYGQD
INRPDFDSLKTSVRFGTGPNTPVEIGNPGLVPEKVTSYDASLSYYFAPAAVVSVGVFHKR
RTNLFVTLETAPFVDPVTGFKDITAPCEGGGIYNPIADRNVFSASPGNGLCVPVSTTIND
TGVTKQTGVEVAFQYNLSAFEDSIGFASGFGLAANYTYQKFSGGQATDTSDADSRGTAIL
ESSSGLTGPFTAVQGLLDFSPHAYNVTLFYEKYGLSARARYTWRDAFRTLDTAGGATQGS
TIGFPVTTAARGQLNGSITYDLTDNINIGVEGVNLTKSKIEQYCVNDGALLCFQGLPDRR
LTFGASIKF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgactctggtggctgcgccagccttcgcccaggaagcggaggatgatcaggcagatgac
aatgtaattgtggtttccggcatccgcggctcgctcgcgaaggcgctggatgaaaagcgc
aatgcggaaagccttgtcgaagtcattcaggccgaggatatcggcaagctgcccgaccag
aatctggccgaggttctcgagaatatcacaggggtgcagatcaccagagaggccggtatc
ggaaccggagtccagatccgtggttccaacgataaccgcattgagatcaacggggtcggt
accgtcgggtccggttcggggcgcagtggcatcaattttgaagatatcaacgcggcgatc
atttcttcgctcgaagttatcaaggcgccaacggccatgacaaccgaaggttcggtcggt
ggcaccatcaacctgcgcacgatccgccctctggatctccgggatacgctaatcgctttc
cgcgcccagggcgaatatagcgagcagtcggaaagcgttcagccccgcatatcaggtagt
tttggcaaaaattgggacaccggtgcgggccgtatcggtatcgtgctcagtgggagctat
gccaagcaggatgcttcgtcatcgcgtcctcgtgtcgaccgggatactctgattccccag
ggaaccagcgtgaccgcagcgggggctcctggtccggattttgactatcttggtatccag
ttcctgaaccaggagttcgagattttcaactacgagacttataatgtcgccggttcgctc
gaatgggcgccgtcagacagtctgaaattatatgtcgacggtttttacaacaagcagacg
cgccggcagcagagtaccagaattcagggctcaggcgtgagttcagtccgtaataccaac
gtcccggatacctttgaaacgatcaatttcggttctctcggcggtgtcgatctgggcagc
atccaggcggcagaaaccggtacgcttcagccgaatgtcccgaatgaacccaatttgcgc
ttctcaagcgataccggcgcccggctgaccgaaagcaatctgataagggctggcggagaa
tgggagagcggccgattcaaggcacggatcgaggggtcgcgtacgctcgccagttcgcgc
actcccgacctcagcacgacgctgaatttcatcaacccgaacacgccgattaccggatct
gcgaacgataacggcacgccgttcgcttatgatctgtccggcgggtcgctcgcattcgga
atagataccagttcgccctttgctccgacggttgcccagctgcttgacccgaacaacgtt
gtgctcgatgccgtgtcggtcagcgacaatagcaacaggaatgtcgaatataccgggcgc
atggacttcacgctcgatcttgaagatctgactggctttctgacatcttttaatttgggt
tatcggtataatgaccggtcgacggagtttaatgaaataacgtccagcatcggtctgtca
gcactggccgacagtccgaacgggtcggtgttttcccagctgctggttgccgggccttct
aatttcggcaaggccgatggccggtctctgttcttcggtgattttctgatcatcgatccg
aatctcgcctattccgatcaggcaggaacgctggccacattgcaggccgcattgctggcc
gaaccgggcgggcgtgtattggcggatcccagcttcaatccggcttccttttaccggatc
accgaacaaacccacgcggtgtacggccagctcaattttgcagcgggtatttttagcggg
aacgccggcttgcgctacgtcgacacggccatcaattcggtgggcaacaatgtcgatgcg
aacggcaatataatcaatcagaccaatacgccgggcaaatatcggttcctgttgccaagg
gtcaatctggcggccgatttgaccagcgatatcgtgctccgggcaagctatggtcaggat
atcaatcgccccgatttcgattccctgaaaacatctgtacggtttggaacgggtccgaat
acgccggtcgaaatcggtaatccgggtctggtgccggaaaaagtgacatcttatgatgct
tcgctgagctattatttcgctcctgcggcggtggtcagcgttggtgtcttccacaaacgg
cggaccaacctgttcgtaacgctggaaactgcgcccttcgtcgatccggttaccggcttc
aaggatattaccgcgccatgtgaagggggcgggatatataatccgatcgccgatcgaaac
gtattttcggcctctcccggcaacgggctgtgcgtgccggtttcgaccacgataaacgat
acgggcgtgaccaagcagacaggtgtcgaagttgctttccagtacaatctgtcagctttt
gaagacagtatcggctttgcatccggttttggtttggcggccaactatacctatcagaag
ttcagcggcgggcaggcaaccgacacatccgacgcggacagtcgcggaacggctattctt
gaatcgagcagcggtcttaccggtccctttacagcggttcagggcttgctcgatttctcg
ccgcatgcctataatgtcacgctgttctacgagaaatatggattgtcggctcgtgcgcgt
tacacatggcgtgatgcgtttcgcacgctggacaccgctggtggggcaacccagggcagc
acgattggtttcccggtcactactgcggcgcgtggacagctgaacggcagtatcacctat
gatctgaccgataatatcaatatcggtgtcgaaggcgtcaatctgaccaagtccaaaatc
gagcaatattgtgtgaacgatggcgcgttgctgtgcttccagggtttgccggaccggaga
ctgacatttggcgccagcatcaagttctag
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