Spirosoma aureum: G8759_00805
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Entry
G8759_00805 CDS
T06520
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spib
Spirosoma aureum
Pathway
spib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G8759_00805 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spib03021
]
G8759_00805 (rpoB)
03400 DNA repair and recombination proteins [BR:
spib03400
]
G8759_00805 (rpoB)
Enzymes [BR:
spib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G8759_00805 (rpoB)
Transcription machinery [BR:
spib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G8759_00805 (rpoB)
DNA repair and recombination proteins [BR:
spib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G8759_00805 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIP11281
UniProt:
A0A6G9AFP7
LinkDB
All DBs
Position
complement(196627..200496)
Genome browser
AA seq
1289 aa
AA seq
DB search
MATNAKISTRKNFATIQPVIGYPDFLDIQVKSFKDFFQLDTPSNQRSEEGLFKVFQENFP
ISDSRENFKLEFIDYSVDPPKYSVDESIDRGLTYSVPLKAKLRLSNNDPDNEDFETIEQE
VFLGNIPYMTEKGSFVINGAERVIVSQLHRSPGVFFSMSKHTNGTKLYSARIIPFKGSWI
EFSTDVNNVMYAYIDRKKKFPVTTLLRAIGFGSDKDILDLFGLSEEVPATPANLKKAIGR
RLAARVLRTWTEDFVDEDTGEVVSISRNEVLLERDSAISADDIDVITDSGQKSVILHKED
MNMADYNIIYNTLQKDSSNSEKEAVEQIYRQLRNADAPDEQTAREIIQSLFFSDKRYDLG
DVGRYRINKKLGLDISSEMKVLTTEDIVSIVKYLIGLINSKAVVDDIDHLSNRRVRTVGE
QLYAQFGVGLARMARTIKERMNVRDNEDFKPVDLINARTLSSVINSFFGTNQLSQFMDQT
NPLAEVTHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVY
AKINSMGFIETPYRIIENGKVSIDKPVMYLTAEEEDTHYIAQANAGIDDKGNFHVDRLKA
RFEGDFPMAEPANVTFMDIAPNQIVSVAASMIPFLEHDDANRALMGSNMQRQAVPLLRPE
APIVGTGLEGRVAVDSRTLVIAEADGVIEFVDSTKIVVRYELDDDQLAVTFDEDRKTYNL
IKFRRTNQDTCINLKPTVLKGQKVKKGDVLCEGYATQAGELALGRNMKVAFMPWQGYNFE
DAIVISERVVREDIFTSIHIEEFELEVRDTKRGEEELTSEIPNVSEETVRNLDENGIVRI
GTEVKEGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASKKAPPSLKGVVIDTKL
FARPAKEDRGKHKDEVKALMKKYGRELNDFRARMIEKVVTLLDGKTSVGVKHKFGDEIVS
KGVKFNRKNITENLFPDKNSYRDESGYAVPEEANILIDVNLDGWTDDDKLNQMIVHLVKN
YNNRRSEITGRFKRERFTLEVGDELPAGIVKLAKVYIAKKRKLKVGDKMAGRHGNKGVVA
RIVRDEDMPFLEDGTKVDIVLNPLGVPSRMNLGQIYETVLAWAGQKLDRKYATPIFDGAT
EQQVVDELDAAGLPSFGRTYLYNGLTGDRFDQPVTVGIIYMLKLGHLVDDKMHARSIGPY
SLITQQPLGGKAQFGGQRFGEMEVWALEAFGASNILQEILTVKSDDVVGRAKAYEAIVKG
ENLPKPNIPESFNVLVHELRGLALEITLE
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaaacgcgaaaatcagtacgcgcaaaaattttgcgacgattcagccagtgatt
gggtatccagattttttggatattcaagtaaaatccttcaaagattttttccagcttgat
accccctcgaatcaacgttcggaggaaggattattcaaggtttttcaggaaaacttccca
atttcagactcccgcgagaatttcaagctggagttcattgattattctgttgatccaccg
aaatactccgttgacgagtctattgatcgggggttaacgtactcggtgcctttgaaagcc
aagctgcgcctgtcgaacaacgatcccgataacgaggattttgaaacgatcgagcaggag
gtattcctgggtaacattccgtacatgaccgagaaaggctccttcgtcattaacggagca
gaacgggtgattgtttcacaattgcaccgttcgccaggcgtgttcttctccatgagcaag
cacacaaatggcaccaaactctattcagcccggattattccatttaaaggatcatggatc
gagttctcgactgacgttaacaacgtcatgtatgcgtacatcgaccggaaaaagaaattc
ccggttacaacgctgttgcgtgccattggttttgggtcagataaagacattcttgatctg
tttggtctgtcagaagaagtaccggcaacgccagcaaacctgaaaaaagcgatcggtcgc
cggttagctgcccgggtactgcgtacatggaccgaagacttcgtcgatgaagacacaggt
gaagtagtttcgattagccggaatgaggtattgcttgagcgtgactcggctatctcagca
gacgatatcgatgtaattacggattcaggtcagaagtcagtcatcctgcataaggaggat
atgaatatggccgattacaatatcatttataatacgctgcagaaagatagctcaaactct
gaaaaagaggccgttgagcaaatctatcggcagcttcggaatgctgatgcacccgatgag
caaactgctcgggaaatcatccagagtttgttcttttcagacaaacggtatgatcttggt
gatgttggccgttaccggattaacaaaaaactcggtctcgacatttcttcggagatgaag
gttctaacgacagaagatattgtttctatcgtgaaatacctgattggcctgattaactcg
aaagccgttgtcgatgatattgaccaccttagcaaccggcgtgtccgtacagtaggtgag
cagttatatgcccagtttggtgttggtttggcccggatggcccggacaatcaaagaacgg
atgaacgtacgggataacgaggactttaaacccgttgacctgattaacgcccgtactctg
tcgtcggtgatcaattcgttctttggaacaaaccagctgtcgcagttcatggaccagact
aacccactagctgaagtgacgcacaagcgtcgtatgtcagctctgggacccggtggtctg
tcgcgcgaacgggccggtttcgaggttcgtgacgtacactacacgcactacggtcgtctg
tgtaccatcgaaaccccggaaggtccgaacatcggtctgatttcgtcactttgcgtctat
gctaaaatcaatagcatgggctttatcgaaaccccgtaccgtatcattgaaaacggtaag
gtgtctatagataagcctgtgatgtatctgacggctgaagaagaagatacgcattatatc
gcacaggcaaacgccggtattgatgataagggtaacttccacgtcgatcgcctgaaggct
cgttttgaaggtgacttcccgatggctgaacctgcgaatgtaacgttcatggatatagcg
ccgaaccagattgtatcggtggctgcttccatgattccgttccttgagcacgacgatgca
aaccgcgccctgatgggatcgaacatgcagcgtcaggcagttccactgctccgcccggaa
gctccgattgtaggaacgggtctggaaggacgtgtagctgttgattcacggacgctggtt
attgcggaagctgatggtgttattgagtttgttgattcaaccaaaatcgtagttcgctac
gagcttgatgatgatcaactggcagtaacatttgatgaagaccggaagacttataacctg
atcaaattccgtcggacgaaccaggatacttgcatcaaccttaaaccaactgtcctgaaa
ggtcagaaagtgaagaagggcgatgtactttgcgaaggctatgctacacaggctggcgag
ttagcacttggccggaacatgaaggttgccttcatgccatggcaagggtataacttcgag
gatgctattgtgatttcggagcgggttgttcgtgaagatattttcacttcgatccacatc
gaagaatttgaactggaagtacgcgacacgaagcgtggtgaagaggaattaacctccgaa
attccgaacgtaagcgaagaaacggttcgtaaccttgacgaaaacggtatcgttcgtatt
ggtacagaagtgaaggaaggcgatattctgattggtaagattacaccaaaaggagagagc
gatcctacgccagaagaaaaactgctccgtgctatcttcggtgacaaagccggtgacgtg
aaagatgcttctaaaaaggcaccaccgtcattgaaaggcgttgttattgacactaagttg
tttgcgcgcccggctaaagaagaccggggtaagcacaaagacgaagtgaaagcactgatg
aagaaatatggccgtgagctgaatgacttccgtgcccgcatgatcgaaaaagtggttacg
cttctcgatggcaaaaccagcgtgggtgttaagcataaattcggtgatgaaattgtcagt
aaaggtgtgaagtttaaccggaagaacattacggaaaacttattccctgacaagaactca
tatcgcgacgaaagtggttacgctgtgccggaagaagcgaacatcctgatcgatgtcaat
ttagatggctggacggacgatgataagctgaatcagatgattgttcatctggtgaagaac
tacaacaatcgtcggagcgaaattacgggccgattcaagcgtgaacgctttacacttgaa
gttggtgatgaattgccagcaggtatcgtgaaactggctaaggtctatatcgctaagaag
cggaagctgaaagtaggggataagatggccggtcgtcacggtaacaaaggggttgttgcc
cggattgtacgggatgaagacatgccattcctggaagatggaacaaaagtcgatatcgta
ttgaatccacttggcgtaccatctcgtatgaaccttgggcagatttatgaaaccgtatta
gcatgggctggtcagaaactggatcggaagtatgcaacgccaatttttgacggagctaca
gaacaacaagttgttgatgagttagatgctgccggtttgccatcatttggtcgtacatac
ctctataatggtctaacgggtgaccgcttcgatcaacctgtaacagtcggtatcatctac
atgctcaaactcggacacctggtggacgataagatgcacgctcgttcaattggaccctac
tcgctcattacccagcaaccactgggtggtaaggcgcagtttggtggtcaacggttcggg
gagatggaagtgtgggcgttggaggccttcggggcatcgaacatcctgcaggaaatcctg
acggtgaagtcggatgacgttgttggccgcgcgaaggcatacgaagcgatcgtgaaaggt
gaaaacctgccgaagccgaatattccggagtcgttcaacgtactcgttcacgaattgcgt
ggtctggcacttgaaattacattagagtaa
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