Spirosoma sp. KCTC 42546: EXU85_18805
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Entry
EXU85_18805 CDS
T06164
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00541
Biosynthesis of various nucleotide sugars
spik01100
Metabolic pathways
spik01250
Biosynthesis of nucleotide sugars
Module
spik_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EXU85_18805 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spik01005
]
EXU85_18805 (kdsB)
Enzymes [BR:
spik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
EXU85_18805 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
spik01005
]
Lipid A
EXU85_18805 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Motif
Other DBs
NCBI-ProteinID:
QDK80544
UniProt:
A0A515A123
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Position
complement(4585461..4586216)
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AA seq
251 aa
AA seq
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MIIGIIPARYGSTRFPGKPLADIGGKSMIQRVLEQCQQASSLHKVVVATDDERIAEAVRR
LGEEVVMTRTDHPSGTDRCWEAYDRLIADGLIPGDSSDYVLNIQGDEPFIDPAQIDELAA
ILDGTVELATQMASVDSAAMLHDPKEAKIVVNTQNEALYFSRSAVPYLWGIEPDQWHVHH
AYHRHVGLYAYRADVLEKITQLPPSLLEKAESLEQLRWLEAGYRIKLVSTNFQTPSVDSP
ADIEKILRSEL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgataatcggtattattcccgcccggtacggatcgactcgttttccagggaaacctctg
gcagatattggcggaaaatctatgattcagcgcgtgctggaacagtgccaacaggcctcg
tctttacataaagtagtcgtggcaaccgacgacgaacgcattgcggaagccgttcggcgc
ttgggcgaagaagttgtaatgacccgtaccgatcatccaagtggcaccgaccgctgctgg
gaagcctacgaccggcttattgccgacggccttattcctggcgattcatcggattacgtt
ctgaatattcagggtgatgaaccgtttatcgatccggcgcagattgacgaattagcggct
attctggatggaaccgtagaactggcaacgcaaatggcatcggtcgattccgcggctatg
ttgcacgatccgaaagaagccaagattgttgttaatacccaaaatgaggctttatacttc
agccgttcagccgttccgtatttgtggggtattgagccggatcagtggcatgtgcatcat
gcctatcatcggcatgttgggctgtatgcataccgtgccgatgttcttgagaaaatcacc
caattgcctccgtctctgctagagaaagctgagtcactggaacaattacgctggctggaa
gcaggctaccgtataaaactggtatccacaaacttccaaactcctagtgtcgatagcccc
gctgatatcgagaaaatcctacgaagcgaattgtaa
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