Sardina pilchardus (sardine): 134060216
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Entry
134060216 CDS
T10667
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04517
IgSF CAM signaling
spil04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134060216 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134060216 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134060216 (rapgef2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134060216
NCBI-ProteinID:
XP_062372832
LinkDB
All DBs
Position
2:3512370..3542652
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AA seq
1490 aa
AA seq
DB search
MASFVDNSFRHAVIKIPAERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSARRGCECIVLEPSEMLVV
DYVDESEVYFQRQASHRQSRRRFRKINQSGERETIIDTVEHDDYPLSSSKPPLPPTYHSE
SPKQQLAVDFSKLHLSESLHPHLTRSSHSACSFTSESGSSSLSDIYQSTESECGELDLSG
LPETAVDSDEEEEDDEEEDVSRSADPLMSRDVVRDCLEKDPMDRTDDDIEQLLEFMQQLP
AFANLSVWVRRELCAVMVFAVVERAGTVVLNHGEELDSWSVILNGSVEILYPDGQSETLC
MGSSFGVTPSMEKELMVGVMKTKVDDCQFVCIAQQEYCHILNRVELNTQRVEEEGEIVMV
KEHRDLDRTGTRKGHIVVKGTCERLMQHLVEDHSVVDPTYIEDFLLTYRTFLPRPLSLGH
RLLEWFKEPSLRDKVTRVVLMWVNNHFSDFEEDDAMSGFLEEFQSCLEREKMTGHLRLLN
IACAAQAKPRVVCVSRLSRDAPLPFSLLGGAERGTRLFISAVEVGSNADEAGLKRGDQIL
EVNGQSFENLLLSKAMEILKGQLQLSMSVKTNLLVFKELVSRVLEERRSGVPHLPKIGDA
RKNRLSVPDLAVTLGGGGQEKVNRKAKAHTVGGRNKLLKILDKTRISILPQKPYSVGQSQ
DDSMVGLKPSKHVSASLTASGTLSPSNPDLQNQQVASEHTNCQSEQDQVLRVFKADQQSR
YLMVTKESTAREVINHAMREFGLSAPPEAYSLCEVTVTPEGVTKQRRLPDQLNKLADRIQ
LSSRYYLKSNTETETLCSDVEAQELLRESQVCLLSLSSVELANQLSSRNYLLFSSIHPVD
YISDLFKLRPAPALASATLRQFEDLINQETFWVASEIVKEPNQVRRAKVIKQLIKVAARC
REVNNYNSTFNIISGLNLAPVSRLRGTWEKLPAKYDKLLSELQTVFDPSRNMAKYRNLLN
TPPTHTLQPPVIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAREIRHVGRMATVYT
DPTLLYRTRKKKWRSLGSLSQTGSSTVLDMALIGQKKRSRRGSFLGAKRLYEEDLMIRRV
RQYLTAYVHVLQSHEELLHTLSLQCEPAAQPVSKSSGERRTVDSSPAMPRSPTPQAPHTH
LARRRSSNKETFGPKSPQPPQKVLNHSEEGRSQQKSQVEDSQSNASSLLSSPPVSPQSTP
RRDVYPSADVDQYSLLSSSSCDLMEDVRGTHAHAHINMPAHTQSASNILSTARTEPDQIS
LGSYSLSQDQCDRASLDAADSGRGSWTSCSSGSHDNIQSIPQRCWDTLSEGAGGVRGYWT
TPTGYWGDELEGETGTIKRRGNKPVIGHREGRFREPPPTPPGYTPLAEVSYNPPPGRRPP
DYNAALQRSRLLKRTCDSPGPIGVQQIGHSHRQAPRPPQGKEDGEQVSAV
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttgtagacaatagttttcgtcatgcagtaataaaaatcccggcggagagg
acgcaacaggatctccagattgtgtactcctacctgcatgggatggaagcactgtccaac
cttagagaacaccagctcaggttaatgtgtgaaacagtacgatatgaacagcatgaggcc
aatgaagttctctactatcctgatgacattggaagctgctggtacatactgctgtctgga
tcagtcttcatcaaagaatccatgtttcttcctcgcagcagctttgggaagcgctcagcc
ggcagtgcaaggagaggctgtgagtgtatcgttctggaaccatctgagatgctagtggtg
gactatgtggacgagagtgaggtgtacttccaacgccaggcgtctcatcggcagtcccgc
cgcaggttccgcaaaatcaaccagagtggcgagagagagaccatcatcgacaccgtggag
catgacgactaccccctcagtagcagcaagccccccctgccccccacctaccactccgag
agccccaaacaacagctggcagtggatttctctaagctccacctctctgagagtctccac
ccccatctcacccgctccagccactcagcatgcagcttcaccagcgagtctggcagcagc
agcctgtcagacatttaccagtccacagagagtgagtgtggagagctggacctgagcggg
ctgccagagacagcagtggactccgatgaggaagaggaggatgacgaagaggaagacgtc
agtcgctccgccgacccgctaatgagcagagatgtagtgagggactgtctagagaaggac
cccatggaccgcacagatgatgacatcgagcagttactggagtttatgcagcagctgcca
gcctttgccaacttgagcgtgtgggtgcgcagagagctgtgtgccgtcatggtgtttgcc
gtggtggagcgcgcgggaaccgtggtgctgaaccatggagaggagctggactcgtggtca
gttattctcaatgggtcagtggagattctgtaccctgacggccagagtgagacgttgtgc
atggggagcagtttcggtgtgaccccctctatggagaaggagctcatggtgggcgtgatg
aagaccaaggtggacgactgccagttcgtgtgcatcgcgcagcaagagtactgccacatt
ctgaaccgcgtggagctcaacacccagcgcgtggaggaggagggcgagatcgtcatggtg
aaggaacaccgcgatctggaccggacaggaacccggaagggacacatagtggtcaagggc
acgtgtgagcggctgatgcagcatctggtggaggaccactccgtggtggaccccacctat
atcgaggacttcctgttgacctatcgcaccttcctgccgcgccccctcagccttgggcac
agactcctggagtggtttaaggagcccagcctgcgagacaaggtgacccgtgtggtgctc
atgtgggtcaataatcacttcagtgactttgaggaggatgacgccatgagtggcttcctg
gaggagtttcaaagctgtttggaaagagagaagatgacgggccacctgcgtctgctgaac
atcgcgtgtgcagcgcaggccaagccccgcgtggtgtgtgtgtcgcgcctctcccgcgac
gcccccctccccttcagcctgctgggcggggccgagagggggacacgcctcttcatcagc
gccgtggaggtgggcagcaacgcagacgaggcggggcttaaacgaggagaccagattctg
gaggtgaacggccagagttttgagaacctgctgctgtctaaagccatggagatcctcaaa
ggccagctacagctctcaatgagtgtcaagaccaacttgctagtgtttaaagagctggtt
tccagagtgttagaggagaggaggagtggagttccgcacctgcctaagattggtgatgcg
cggaagaaccgtctctctgttcctgacctggcggtgacgttagggggcggaggtcaggaa
aaggtcaacaggaaggctaaagctcacacagtgggcggccgcaacaagctcctcaagatt
ctggacaaaactcgcatcagcatcttgccacagaagccatacagtgtgggtcagtcccag
gatgacagcatggtgggtctgaagccgtccaaacatgtgtcggccagtttgaccgccagc
ggaaccctgtcgcctagcaaccctgacctgcagaaccagcaagtagctagtgagcacacc
aactgccaatcagagcaagaccaggtgctgcgtgtgttcaaggctgatcagcagagcagg
tacctgatggttaccaaggagagcacggcgagggaggtgatcaatcacgccatgagagag
tttggtctgagcgcgccccctgaagcctattcgctgtgtgaggtgaccgtcacaccggag
ggcgtgaccaaacagagacggcttcctgatcagctcaacaaactcgctgataggatacag
ctcagttccaggtactacctgaagagcaacactgagacggagacgctgtgctctgacgtg
gaggcccaggagctgctgcgggagtcgcaggtgtgtctgctgtcgctgagctcggtggag
ctggccaatcagctgtcgtcgcgcaactacctgctcttctccagcatccacccggtggac
tacatcagcgacctgttcaagctgcgcccggcccccgccctcgcctccgccaccctgcgc
cagttcgaggacctcatcaaccaggagaccttctgggtggcctcggagatcgtcaaggag
cccaaccaggtgcgcagggcaaaggtcatcaaacagctcatcaaggtggcagcacgctgt
cgagaggtcaacaactacaactccaccttcaacatcatcagtgggttgaatctggcccct
gtgtctcggctgagggggacttgggagaagcttcctgctaagtatgacaagttgctgtcc
gagctgcagactgtgtttgacccgtcgcgcaacatggccaagtaccgcaacctgctcaac
accccacccacacacactctccagccgcccgtcatcccgctcttccccgtcatcaagaag
gacctcaccttcctgcacgaaggaaatgactcaaaggttgatggtttggtgaactttgag
aagctccgaatgatcgccagagagatccgacatgtgggccgcatggctaccgtgtacaca
gaccccacgctcctgtacaggaccaggaaaaagaagtggaggagtctggggtccctgagc
cagacgggcagctccacggtgctggacatggctctgattggccagaagaagcgcagcagg
cggggctccttcctgggggccaagcggctgtacgaggaggacctgatgatccggcgcgtg
cgccagtacctcaccgcctacgtgcacgtgctccagagccacgaggagctgctgcacaca
ctctccctgcagtgtgagcccgccgcacaaccggtgtctaagagttcaggagagaggagg
actgttgactcctcacctgccatgccccgtagtcccacccctcaagccccccacacacac
ctggcccgaaggagatcctccaataaagagacctttggtcccaagtccccgcagcccccg
cagaaggtcctcaaccactctgaagaggggcggagccagcagaagagccaggtagaggac
agccaatcaaacgcttcgtcactgctctcctctccacctgtgtcaccacagagcacacca
cgcagagatgtgtaccccagcgcagatgtggaccagtacagcctcctgagctcgtcctcg
tgtgacctgatggaggacgtgcggggcacacacgcccacgcccacatcaacatgcccgca
cacacacagtccgccagcaacatcctctctaccgccaggacagagcctgaccagatcagc
ctgggctcctactctctgtctcaggaccagtgtgatcgcgcatcactggacgccgctgac
agtggccgtggcagttggacttcctgctccagtggttcccatgacaacatccagagcatc
ccgcagaggtgctgggacacgttgtctgaaggtgcaggaggtgtgcggggctactggacc
acacccactggttactggggagacgagctggagggggagacgggaaccatcaagcgccgt
ggtaacaagcctgtcataggtcacagagaagggcgtttccgtgaacccccgcccacgccg
ccaggttacacgccattggcggaggtcagctacaacccgccccctgggagacggccccca
gactacaacgctgccctgcagaggtcacgccttctcaagagaacatgtgactctccaggg
ccaattggtgttcagcagattggccactcccacaggcaggctccacgcccccctcagggg
aaggaagatggggagcaggtgtcagcggtgtga
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