Sardina pilchardus (sardine): 134062242
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Entry
134062242 CDS
T10667
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134062242 (cntn1b)
04517 IgSF CAM signaling
134062242 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134062242 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
spil00537
]
134062242 (cntn1b)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
Contactins
134062242 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
spil00537
]
Others
134062242 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_4
Motif
Other DBs
NCBI-GeneID:
134062242
NCBI-ProteinID:
XP_062374179
LinkDB
All DBs
Position
17:complement(11004733..11023231)
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AA seq
1034 aa
AA seq
DB search
MATPAVVVCVLSSLLSLAGAYRMPWERRMFDDEATGYGPIFEEEPQDLVYAEDNPDNRIS
MNCRVRANPPATIRWWLNNWEIKLLEQPDEHYSLVGGNLVITNPSKNKHAGKYACVANNL
YGTIISKEATVKFGYLDNFPTEEREPVLVKEGQGVVLLCDPPNRDPYNVKFHWLFNDYPN
FIDMDRRRFISQTTGNLYIAMVEASDVGNYSCFVSSAKIGKSVFSKPIPLIPQPQENPAK
KYAADIKVKFPKTYALLAKNITLECFALGNPIPHIRWRKLDADLPPNYEVTMNGALLHLI
NVQYEDEGSYECEALNVKGKDWHRQWVYVEGPPEWASHINNTEMDVGSKHTMRCAAMGKP
WPWIRWLKDGYSYGKGELQFDSLTFTHSGMYQCVAENPWGTIYANAELRVTAHAPTFEYN
PVRKQLLGARGGRVVIECKPQAAPRPTFTWFKGKEKLGNSTRYSVWLDGNLEIFNSTNDD
EGVYTCFAENDRGKANSTGTLTITDATKIVVAPSDVDIMVGDSTVLPCTASYDPMLDLTF
IWHLDSIIIDFDLMRKHFELLLDRENSGDLMIKSALAKHSGRYSCTAQTVVDNVTVIADV
VVQGPPGPPGGVMVMEVRDTSVKLVWTLGSDHGLPIKHHIVQTRDYYALDPDDWKEAKTS
PVFLDRFATAAEVVDLYPYMQYEFRVIAVNELGPGESSWPSKKTTTWDAVPAVAPEDVGG
FVGINGELTITWTPIQPQFYYGKKCGYVVAFKPHENYDWGWATVTDPETRRYVNKELYIT
PGTEIQVKVKAYNNKGEGPYSLSSVVYAPEGVPTEQPLDVYARPVSATEALVWWLPVFLQ
PPLQWVDGYQVRYWRKYDDNEAAAQRILVGNGVNNTRLENMLPDSHYLIEVRAYNGIGLG
PPSEHCEMFTRRPPPTRRLRLFKYVSWSGKWLYLSWDHIYSYWNESFIEGYKILYRKVGY
RYGKLYTTGRHYIDFPYPETGDWIIEVRAHCEGGDGPIGRVSVQGELAGGILSAQSLSLS
SLLLFVMGAMAINL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccagctgtggtggtctgtgttctctcctcactcctctccttggcaggggcc
tacaggatgccttgggagcggcgaatgtttgatgacgaggccacaggttacggccccatt
tttgaggaggagccccaggatctggtgtacgcagaggacaaccccgacaatcgcatctcc
atgaactgcagggtgcgcgccaaccccccggccaccatcagatggtggctgaacaactgg
gagatcaagctgctggagcagccggatgagcactacagcctggtggggggcaacctggtg
atcaccaaccccagcaagaacaagcacgccggcaagtacgcatgcgtggccaacaacctc
tacggcaccatcatcagcaaagaggccaccgtcaagtttggatatctggataatttccct
accgaggagcgggagccggtgcttgtgaaggaggggcagggtgtggtgctgctctgtgat
ccacctaaccgggacccctataatgtgaaattccattggctgttcaatgactaccccaac
ttcattgacatggaccggcgtcggttcatctcccagaccacgggcaacctgtacatcgcc
atggtggaggcgtccgacgtgggcaactactcgtgcttcgtctccagcgccaagatcggc
aagagtgtcttcagcaagcccatccccctcatcccccagccacaggagaatcctgctaag
aagtatgctgcagacatcaaagtgaagttccctaaaacctatgccctgcttgccaaaaac
atcaccctggagtgctttgctcttggaaaccccatcccacacatccgctggaggaagctg
gacgcggacctgccgcccaactacgaggtgacgatgaacggagcgctgctgcacctgatc
aacgtgcagtacgaggacgagggcagctacgagtgcgaggccctcaacgtcaagggcaaa
gactggcacaggcagtgggtctacgtggaaggacccccagagtgggcatcgcatatcaac
aacactgagatggacgtgggcagcaagcacacgatgagatgtgccgccatggggaagccc
tggccctggatacgctggctgaaggatggctactcgtatgggaaaggggagctgcagttt
gacagtctgacattcacccactcgggcatgtaccagtgtgtggcggagaacccatgggga
accatctacgccaacgctgagctcagagtgaccgcccacgctccgacttttgagtacaac
cccgtgcggaaacagctgctgggagcccggggcgggcgagtggtcatcgagtgtaaaccc
caagcggcaccacggcccaccttcacctggtttaaggggaaggagaagctcggcaactct
actaggtattcggtgtggctagatgggaatctggagattttcaactccacaaatgacgat
gagggggtgtatacctgctttgctgagaatgatcggggcaaagccaacagcacagggact
ctcactatcactgatgccactaagatcgtggtggccccctcggacgtggacatcatggtg
ggggacagcacagtgcttccctgcaccgcgtcctacgaccccatgctggacctgaccttc
atctggcacctggactccatcatcatcgacttcgacctgatgaggaagcactttgagctg
ctgctggatcgagagaacagtggtgaccttatgataaagagcgcacttgcaaaacactct
ggacgatactcctgcactgcccagaccgtagtggacaacgtcaccgtgattgctgatgtc
gtagtgcaaggcccgcctggccccccaggtggggtgatggtgatggaggtgagggacacg
tcggtgaagctggtctggaccctgggcagcgatcatggcctgcccatcaagcaccacatc
gtccagacgagagattactacgccctcgaccctgacgactggaaggaggcaaagacatct
cctgtcttccttgatcgttttgcaacggcggctgaggtggtggacctctacccttacatg
cagtatgagttccgagtgattgctgtcaacgaattgggccctggcgagtcaagctggccc
tccaagaagaccacgacctgggatgcagtccccgcagtggctccagaagacgtcggaggc
tttgtagggattaacggcgagctcaccatcacttggacgcctattcaaccacagttctac
tacgggaagaagtgcggctacgtggtcgccttcaaaccgcacgagaactacgactggggc
tgggcaacggtgaccgaccccgagaccagacgctacgtcaacaaggaactctacatcacc
ccgggaacggagatccaggtcaaggtcaaggcctacaacaacaagggcgaagggccctac
agtctgtcctctgtcgtctacgcaccagagggagtgcccacggagcagcctctggatgtg
tatgctcgtcccgtgagcgctacagaggccttggtctggtggctgcctgtctttctgcaa
cctccactgcagtgggtggatggctaccaggtgcgctactggagaaagtacgacgacaac
gaggcggcggcgcagcggatcctcgtggggaacggagtgaacaacacgcgcctggagaac
atgctccccgactcgcactacctcatcgaggtgcgcgcctacaacggaatcggccttggc
ccgcccagcgagcactgtgagatgttcaccaggagaccacctccgacgcgcaggctgcgg
ctcttcaagtacgtcagctggagtgggaaatggctctacctgtcctgggaccacatctac
agctattggaacgagtccttcattgagggatacaagattctgtacaggaaggtgggctat
cggtatgggaagctctacaccaccggtagacactacatcgacttcccctaccccgagacg
ggtgactggatcatcgaggtgcgtgcccactgtgagggtggagatggaccaatcggacgt
gtctccgtccagggagagctcgccggtggcatcctcagcgctcagtctctgagcctgagc
tctcttctgctgtttgtcatgggcgcgatggctatcaacctgtaa
DBGET
integrated database retrieval system