Sardina pilchardus (sardine): 134070925
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Entry
134070925 CDS
T10667
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134070925 (scn1lab)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134070925 (scn1lab)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Zip
DUF3138
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
134070925
NCBI-ProteinID:
XP_062383436
LinkDB
All DBs
Position
23:21817206..21854899
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AA seq
2058 aa
AA seq
DB search
MAAQLLVPPGPESFRRFCPESLAAIERRIAEEFARQPKDARRCDPDDENGPKPNSDLEAG
KSLPFIYGDIPRGLVSVPLEDLDTYYHNQTTFIVLNRGKAIFRFNATPALYILSPFNLMR
RIAIKVLVHSMFSFFIMCTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRIPPNETLAVPTGLPPNLTT
LGGAEDSQLLANMSLMTFNSTFNSTFNWTEYLMDEENYYYLPGSRDALLCGNGSDAGQCP
EGFSCIKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRVAGKPYMIFFVLV
IFLGSFYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQLAAAATT
GESGDYSASCGCRRPPSEESSSGGGSRLSSKSAKERRNRRKKRRQREEQEEEEEEEEEEE
EAEKMDAEKFHKSASEDSIKSSFRFSIDANRLSYDKKCSTPNQSLLSISRASLFSPRRTS
RASLFSFRGRARDFGSENDFADDEHSTFEDSESRRGSLFVPRRPADRRGSNVSQRSLGAP
RIRLPANGKMHCTVDCNGVVSLVGGTSVPTSPVGRLLPEGTTTESDVRKKRSGSHQLSLD
DTVARQRAMSVASILTNTMEELEESRQKCPPCWYKFANTFLIWDCCQGWLKIKEVVNMVV
MDPFVDLAITICIVLNTLFMAMEHYPMTKEFNDVLSVGNLVFTGIFTAEMCFKVIALDPY
YYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISSDCELPRWHMNDFFHSFLIVF
RVLCGEWIETMWDCMEVAGQTMCIIVFMLVMVIGNLVVLNLFLALLLSSFSADNLAATDD
DSEMNNLQIAVGRIHSGIAFIKAAMRQFLQSLCLSAGGKPGALDEEKPLDDLHSDVDKEN
CLINHTSLVVSVGVGVGAGGELTKDFLKTESGGGGGGGHVTTGNGVDGRGGYGMEEGDYT
SFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDRHLSSSEGSTVDIR
PPGEGPEGSIELETEESLDPEACFTEDCVRRFHCCQVNVEVGRWKSWWTLRKTCFRIVEH
NWFETFIIFMILLSSGALAFEDIYIEQRKTVKTMLEYADKVFTYVFILEMLLKWVAYGFV
KYFTNAWCWLDFLIVDVSVVSLLANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVV
NALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNSTTDELLPVSLVNNKTECL
ALVNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPMYEVNLYM
YLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPTNKFQGCVFDFVTRQAFDIVIMILICLNMVTMMVETDDQTTDMDNCLYWINLV
FIVLFTGECSLKMISLRHYYFSLGWNIFDFVVVILSIVGMFLSDVIEKYFVSPTLFRVIR
LARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHEA
GIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNNKEPDCSYRMEHPGSSVRGNCGNP
SVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPDA
TQFVEYHKLPEFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVLGEE
GEMDALRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSATIIQRAFRRHRLRQTVKRAC
LMYRQGRLLQDGEAKAPDKEVLVIVKFNENSASDKTDMTPSSASPPSYNSVAKSDKDKYE
KDRREKEDKAKDTRDRKK
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccagcttcttgttcctcccggacctgaaagcttccggcggttctgcccggag
tccctggccgccatcgagaggcgcatcgctgaggagtttgcgcggcagcccaaggacgcg
cggcggtgtgacccggacgacgagaatgggcccaagcccaacagtgacctggaggcaggg
aagtccctccccttcatctacggggacatcccacgcggcctggtgtccgtacccctggag
gacctggacacctactaccacaatcagacaacatttatagtgttaaaccgtgggaaggcc
atcttccgcttcaacgccacccctgccctctacatccttagccccttcaacctgatgcgg
agaatcgccatcaaagtgcttgtgcattcgatgttcagttttttcatcatgtgcactatt
ctgaccaactgcgccttcatgacgctgagcaatccaccagaatgggccaaaaatgtcgag
tacacgttcacggggatctacacctttgagtccctgatcaagatcctggcgcgcggcttc
tgtgtggggaagttcaccttcctcagagacccgtggaactggctcgacttcagtgttatc
tccatggcatatgtgacagaatttgtggacctcggcaatgtctctgcactccgaaccttc
agggttcttcgggctctcaaaactatatcagtcatcccaggcctgaagaccatcgtgggc
gctctgatccagtcggtgaagaagctgtcggacgtgatgatcctgacggtgttctgcctg
agcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgcggcagaagtgcgtg
cgcatcccgccgaacgagaccctggccgtgcccaccggcctgccacccaacctcaccacg
ctgggaggggcagaagactcgcagctactggccaacatgagcctgatgacgttcaacagc
accttcaacagcaccttcaactggactgagtaccttatggatgaagaaaactattactat
ctcccaggcagtcgtgatgccctactctgtggaaatggcagtgatgcagggcagtgccca
gagggcttttcgtgcatcaaggcgggtcggaacccgaactacggctacaccagcttcgac
accttcagctgggccttcctgtctctcttccgcctcatgacgcaggactactgggagaac
ctctatcagcagaccctccgtgtggcggggaagccctacatgatcttcttcgtgctggtg
atcttcctgggctcgttctacctggtcaacctgatcctggctgtggtggccatggcctac
gacgagcagaaccaggccaccatcgaggaggcgcagcagaaggaggaggagttccaggcc
atgctggagcagctcaagagacagcaggaggaggcgcagcttgcggcggcggcgaccacg
ggcgagagtggcgactacagcgccagctgcggctgccggcggcccccgtcggaggagagc
tcgtcgggcggcggctcgcgcctcagctccaagagcgccaaggagcgtcgcaaccgccgc
aagaagcggaggcagcgcgaggagcaggaggaggaagaggaggaggaggaggaggaggaa
gaggccgagaagatggacgccgagaagttccacaagtcggcgtcggaggacagtatcaaa
tcctccttccgcttctccatcgacgccaaccggctctcctacgataagaagtgctcgaca
cccaaccagtctctcctgagcatctcgcgcgcctccctcttttccccgcgccggacgagc
cgagcgagcctcttcagcttccggggccgggcgcgcgactttggctcggagaacgacttc
gccgacgacgagcacagcacgttcgaggacagcgagagccggcgcgggtcgctcttcgtc
ccgcggcgccccgccgaccgccgaggctccaacgtcagccagcgcagcctgggggcaccg
cgcatccgcctgcctgccaacgggaagatgcactgcaccgtcgactgcaacggcgtggtg
tcgctggtcgggggcacgtccgtgccaacctcgcccgtcggcaggttgcttccggagggc
accaccactgagtcggatgtgaggaagaagcggtccggctctcaccaactctctctggac
gacactgtggccaggcagagggctatgagcgtggccagcattctcaccaacaccatggag
gaactggaagagtctcgtcagaagtgccccccttgctggtacaagtttgccaacaccttc
ttgatctgggactgctgccaggggtggctgaagatcaaggaggtggtcaacatggtggtg
atggacccgtttgtggacctggctatcactatctgcattgtgctcaacacactcttcatg
gccatggagcactatcccatgaccaaggagttcaacgatgtcctctccgtgggaaacctg
gtgttcactggcatcttcacagctgagatgtgcttcaaggtcatcgctctcgacccctac
tactatttccaggaaggctggaacatctttgatggcatcatcgtcagcctgagcttgatg
gagttgggtctggctaatgtggagggtctttctgttttacggtccttcagattgctaagg
gtatttaagctggccaagtcctggcccaccctcaacatgctcatcaagatcatcggcaac
tcggtgggtgccctgggcaacttgacccttgtcctggccatcatcgtcttcatcttcgcc
gtggttggcatgcagctgtttggcaagagctaccgcgactgcgtgtgcaagatctcgtcc
gactgcgagctgccccgctggcacatgaacgacttcttccactccttcctcatcgtgttc
cgcgtgctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtggccggccag
accatgtgcatcattgtcttcatgctggtcatggtcatcgggaacctggtggttctaaac
ctctttctggccttgctgctgagctcgttcagcgccgacaacctggcggcgacggacgac
gacagcgagatgaacaacctgcagatcgccgtgggccgcatccacagcggcatcgccttc
atcaaggcggccatgcggcagttcctgcagagcctgtgcctgagcgcggggggcaagccg
ggggcgctggatgaggagaagcccctggacgacctccacagcgacgtggacaaggagaac
tgcctgatcaatcacaccagcctggtggtcagcgtgggcgtcggtgtcggagcgggcggg
gaactcaccaaggacttcttgaagacggagagcggaggcggcggcggtggtggccacgtc
accacgggcaacggggtggacgggcggggtggttatgggatggaggagggcgactacacg
tcgttcatccacaacccgagtctgaccgtcactgtgcccatcgcggtcggcgagtccgac
ttcgagaacctgaacacggaggacttcagcagcgactcctcggacgtcgagggaagcaaa
gagaagcttccggtagacaggcacctcagttcgtcagaggggagcacggtggacatccga
cccccaggggagggccctgaaggctccatagaactggagacggaggagtccctggatcca
gaggcctgcttcactgaagactgtgtgaggcgtttccattgctgccaggtaaacgtggag
gtgggtcgctggaagagctggtggacgctgaggaagacctgcttcaggatcgttgagcac
aactggttcgagaccttcatcatcttcatgatccttcttagcagcggtgctctggccttt
gaagacatttacattgagcagaggaagacggtgaagaccatgctggagtacgccgataag
gtcttcacctacgtcttcatcctggagatgctgctcaagtgggtggcctacggcttcgtc
aagtacttcaccaacgcctggtgctggctggacttcctcattgtcgatgtgtcagtggtg
agcctgttagcgaacgctcttggttattcggaactgagtgccatcaagtccctgaggact
ctacgagcactgagacccctgagagccctgtcacgctttgagggcatgagggtggtggtg
aacgctctgctgggcgccatcccctccatcatgaacgtgctgctggtgtgcctcatcttc
tggctcatcttcagcatcatgggcgtcaacctgttcgccggcaagtactaccactgcgtc
aacagcaccaccgacgagctgctgcccgtctcgctggtcaacaacaagacggagtgcctg
gcactggtcaacgacagcgcccgctggaagaacgtcaagatcaacttcgacaacgtgggc
gctggctacctggcactgctgcaagtggctacatttaaaggatggatggatatcatgtat
gcggctgtggactctcgcaatctggaggatcagcccatgtacgaggtgaacctgtacatg
tatctctacttcgtcatcttcatcatcttcggctccttcttcaccctcaacctcttcatt
ggtgtcatcatcgacaacttcaaccagcagaagaaaaagtttggaggtcaggacatcttc
atgacagaggaacagaagaagtattacaatgccatgaagaagctcgggtccaagaaacca
cagaaaccaattccaaggccaacgaacaagttccagggctgcgtgtttgactttgtcacc
aggcaagccttcgacatcgttattatgattctgatctgcctgaacatggtgactatgatg
gtggaaacggacgaccagaccacggacatggacaactgcctctactggatcaacctggtc
ttcattgttctcttcactggcgagtgtagcctcaagatgatctcgctgagacactattac
ttctctcttggatggaacattttcgactttgtggtggtcatcttgtccattgttggtatg
ttcctctcagacgtcatcgagaagtactttgtgtcgccgacgctgttccgagtcatccgc
ctcgctcggatcggccgcatcctgcgtctcatcaaaggggccaagggcatccgcacgctt
ctcttcgccctcatgatgtcccttcccgctctcttcaacatcggcctcctcctcttcctg
gtcatgttcatctacgccatcttcggcatgtccaacttcgcctacgtgaagcacgaggcg
ggcatcgacgacctgttcaacttcgagacgttcggcaactccatgctctgcctgttccag
atcaccacgtcggccggctgggacggactcctggcgcccatcctgaacaacaaggagccc
gactgcagctaccgcatggagcacccgggcagctcggtgcgcggcaactgcggcaacccc
tcggtgggcatcttcttcttcgtctcgtacatcatcatctgcttcctgatcgtggtcaac
atgtacatcgccgtcatcctggagaacttcagcgtggccacggaggagagcgccgagccg
ctgagcgaggacgacttcgagatgttctacgaggtgtgggagcgcttcgacccggacgcc
acgcagttcgtggagtaccacaagctgcccgagttcgccgacgcgctcgacccgccgctg
cgcatccccaagcccaacaagatccagctgatcgccatggacctgcccatggtgagcggc
gaccgcatccactgcctggacatcctcttcgcgttcaccctgcgcgtgctcggcgaggag
ggcgagatggacgccctgcgcggtcagatggaggagcgcttcatggcgtccaacccctcc
aaggtgtcctacgagcccatcaccaccacgctgcgccgcaagcaggaggagatgtccgcc
accatcatccagcgcgccttccgacgccaccgcctgcgccagacggtcaagcgcgcctgc
ctcatgtaccgccagggccggctgctgcaggacggcgaggccaaagcgcccgacaaggag
gtgctggtgatcgtcaagttcaacgagaactcggcctcggacaaaacggacatgaccccg
tcgtcggcctcgccgccctcctacaacagcgtggccaagtccgacaaggacaagtacgag
aaggacaggcgggagaaggaggacaaagcgaaagacactcgggacaggaagaagtga
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integrated database retrieval system
