Sardina pilchardus (sardine): 134071726
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Entry
134071726 CDS
T10667
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134071726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134071726
Transporters [BR:
spil02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
134071726
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
134071726
NCBI-ProteinID:
XP_062384545
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Position
23:complement(5332700..5345301)
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AA seq
539 aa
AA seq
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MIGFYAAVLATGIWASKKSKAKKTTGTVTEVALLGERSIDLTVGIFTTTATWVGGGYILG
MAEAVYSPNQGLIWAQMPLQYALSFIVGGLVFAKPMRERRYVTVMDPFQIRYGKTMTVLM
VIPSLVGDVLWVASALTALGGMLSTIIDLQHVYSVMISAAVATIYTLLGGLYSVAYTDVI
QLIFIFVGLWLCVPFILLNPISLDISITAFNHTYQAPWLGQLKTRDISVWLDEWLTLGLG
AISFQSVQQRNLSAVSPAKAQIANFVAAVLCAIMSVPSILIGAVAASTDWNQTDYGSPSP
YERNEAHVILPLCLENLAPSYVSIIGIGAITAAAMSSIDSCLLSCTSMFTSNLYKNIIRQ
QASDKELMWVIRITVVVAGVFGTALTFIDNSIVFFWIISSDMAYCVILPQLVCVLFCDIS
NSYGAVVGFVLSLLLRFLSGEPLIGLPPVICFPGGEVIDDVYVQPHPVRTVVALFAFLCI
LLFSYIFAYLFRRGTLPKRWDVFGVTKVTISALDNQNSVPTSLSTADRESLMISLDAKS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgataggcttctatgctgcagtcctggccacgggaatatgggcttccaagaaatccaaa
gcaaaaaagaccactggaacagtcacagaggtggctctgctaggagaacgctccatagat
ctgactgttgggattttcacaacaactgctacctgggttggaggaggttacatacttggt
atggcagaagctgtctatagcccaaaccagggactgatctgggcacagatgccactgcag
tatgcactgtcatttattgttggtggtttagtctttgctaagccaatgagagagaggagg
tatgtgactgttatggacccattccagatcaggtacggcaaaactatgactgttctgatg
gttatcccttccctcgttggagacgtgttgtgggtggcgagtgctctcacagctctgggt
ggaatgcttagcaccatcattgatctccagcatgtctactctgtgatgatatctgcagct
gtagcaaccatctacactctccttggggggctgtactctgtggcctacactgatgtcatc
cagttaatcttcatctttgttggtctgtggctctgtgtgccgttcatcctcttgaatccc
atctctcttgacatcagcatcacagccttcaatcacacctaccaggcaccgtggcttggt
cagcttaagacccgggacatctcggtttggttggatgagtggctcacattgggcttggga
gccatttctttccagagtgttcaacagaggaacttgtctgcagtttcaccagctaaagca
cagatcgcaaatttcgttgcagcagtgttgtgtgcaattatgtcagttccttccatactg
ataggagcagtggctgcatctacagactggaatcagactgactatggaagcccatctcca
tatgaacgcaatgaggcacatgtaatccttcctctctgcttggagaacctcgctccctcc
tatgtctccatcattgggattggagcaataacagcagctgccatgtcctccatcgattcg
tgcctcctttcctgcacgtctatgttcacctcaaacctctataagaacatcatcagacag
caggcatcagacaaggagctgatgtgggtgatccggataactgtcgttgtagctggtgtg
tttggtactgcattgactttcattgataacagcattgtgttcttttggatcataagttca
gacatggcctactgtgtcatcctcccccagttagtttgtgtcctattctgtgatatctcc
aatagttatggggcggttgttgggtttgtcttaagcctgctgttgaggttcttaagtggg
gagcccctaatcggcctcccgccagttatctgttttccgggaggtgaagtaattgatgat
gtgtacgtccagcctcaccctgtccgaacagtagttgcgctctttgcgtttctttgcatt
ctattgttctcttacatctttgcctacctctttcgccgtgggacactccccaaaaggtgg
gatgtatttggtgtcaccaaggtcacaatctctgcattagacaaccaaaatagtgtacca
acatcattaagtactgctgatagagagagcttaatgatatcattggatgccaagagttaa
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