Sardina pilchardus (sardine): 134073223
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Entry
134073223 CDS
T10667
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134073223 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134073223 (ss18)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134073223 (ss18)
GBAF(ncBAF) complex
134073223 (ss18)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
134073223
NCBI-ProteinID:
XP_062386228
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All DBs
Position
2:complement(38231583..38245252)
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AA seq
394 aa
AA seq
DB search
MSVAFAPHRPRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMPGGMNQSGPPPQAPHGHNMPSEGPPAAHMQSQMNG
QMPGPNHMPMQGPGPNQPPNMPSGAMNMPPSSHGSMGGYNHAVPSSQGMPTQGQMNMSQG
QPMGSYGPRPSMNMQPSQGPMMHQQPPSQQYNMPPGGAGQHYQGQQNPMGMMGQVNQGNH
VMSQRPMPPYRPPQQGPPQQYPGQEEYYGEQYSHGGQGAPEGGAKNLQKLVTNPGSAQYA
QQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQGYGPSQGGPGQYPNYPQGQGQQYAAYR
APQPGPPQAQQQRPYGYEQVGAHQGVGAKATSHS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagaccgcgcggaaagggtgatataacacccgcgggc
attcaaaagttactggatgaaaacaaccaactgatacagtgcataatggatttccagagc
aaaggaaagacggctgaatgttcacagtaccaacagatgctccacagaaaccttgtatac
ctggctacgatagcagactccaatcagaacatgcaatctcttcttcctgctcccccaacc
cagaacatgcctatgccgggtggcatgaaccagagcggcccccctccccaggccccccac
ggacacaacatgccctccgagggcccacctgccgcacacatgcagagccagatgaatgga
cagatgcctggccctaaccacatgcccatgcagggccctgggcccaaccagccccccaac
atgcccagcggtgccatgaacatgccccccagcagccacggctccatgggcggctacaac
cacgccgtgccctcctcacagggcatgcccactcaaggccagatgaacatgagccaaggc
cagccaatgggaagctacggccctcgacccagcatgaacatgcagcccagtcaaggtcct
atgatgcaccagcagccaccctcccagcagtacaacatgccccctggtggcgccgggcag
cactaccagggccagcagaatcccatgggcatgatgggccaggtgaaccagggcaaccac
gtcatgagccagagacccatgcccccctacaggccaccacagcaaggtcctcctcagcag
tacccaggccaggaggagtactatggagaacagtacagtcacggtgggcagggagctcct
gaaggtggagcaaagaacttacagaagcttgttacaaaccctggaagtgcacagtatgcc
cagcagcaggaggcctaccagcagggccccccccaacagcagggctacccgccccagcag
cagtatcctggacagcagggctaccccggtcagcagcaaggctacggtccatctcaagga
ggccctgggcagtatcctaactaccctcagggtcaaggccagcagtacgcagcctacagg
gccccacaaccaggacctccacaagctcagcaacagcgtccctatggctatgaacaggta
ggtgcacaccaaggggtaggtgctaaagcaacaagtcactcttga
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