Sardina pilchardus (sardine): 134079775
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Entry
134079775 CDS
T10667
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134079775 (trpc4a)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134079775 (trpc4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
134079775
NCBI-ProteinID:
XP_062391835
LinkDB
All DBs
Position
5:11125563..11138463
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AA seq
965 aa
AA seq
DB search
MSQLYFGRTDNSSYRDRIPLRIVRAESELSPQEKAYLTAIEKGDYASVKQALDEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLTYNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCVE
CVSGSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKYE
YEELSHQCKQFAKDLLDQTRSSRELEMILNFRDDMEPLEEEASNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDQVPGWRKLHWMGKSVTCIIVGLLFPLFSLCYLMAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIASLDDDTLADRQGPAPNPVEWMILPWVLGFIWA
EIKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYHRYAGTKVPRCQWEMWHPTL
VAEALFSIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETDAENEKDKCKGIRCKEQNNAFSTLFETLQSLFWSVFGLISLYVTNVKPDHEF
TEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGT
LPPPFNIIPSAKSLWYLFKWIKRHLCSKKHVERTETFQSIGRRAAENLRINHQYQEVLRN
LVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMLKGVKPGMQAVKGGAGSSS
LPFPEQPRRGSAAAVSTGQLKSKLNLLTAASALQQQGGARPAPRPTETLGRLANGSVPRL
AALSSAATVEEEEEEPEPEQQSRGNSASDRGPGVNLQLRHRSTGQSRIYSVSEEVDERRD
SGAEPSSSLSPPPTSSSSRNRDSDEDGDAGAVVETARPSSSGRKKDERKDSQTEGEPKED
EDGAK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtacttcggtcgaacggacaactcttcgtacagggatcgcatccctttg
cgaatagtgcgggccgagtctgagctgtcacctcaggaaaaggcctacctgacggcaata
gagaaaggagattatgccagtgtgaagcaagccctggacgaggctgaaatctactttaaa
ataaacatcaactgcatcgatccgctcggacgcacggcattgctcatcgccatcgagaac
gaaaacttggagatcatagaactccttctcacgtataatgtttatgtcggagatgccttg
ctccacgccattcgcaaggaggtggtcggtgccgtggagctcctgctcaatcacaagaag
cctagcgggggtatgcaggttccgcccatcttacttgacaagcagttctcggacttcact
ccagacataacccccatcatcctagcggcgcacaccaacaactatgagatcatcaagctg
ctggtccagaagggcgtgtcggtgcctcagccgcacgaggtgcgctgcaactgcgtggag
tgcgtgtccggctcggacgtggacagcctgcggcactcgcgctcgcgcctcaacatctac
cgggccctgtccagcccctcgctcatcgccctgtccagcgaggaccccttcctcacggcc
ttccgcctcagctgggagctgcaggagctcagcaaggtggagaacgagttcaagtacgag
tacgaggagctgtcgcaccagtgcaagcagttcgccaaggacctgttggaccaaacgcgc
agctccagggagctggagatgatcctcaacttcagggacgacatggagccgctggaggag
gaggcgagcaacgacctggcacgcctgaaactcgccatcaagtaccaccagaaggagttt
gtggcccagcccaactgtcagcagctgctggcgtcgcgctggtacgaccaggtgcccggc
tggaggaagctgcactggatgggcaagtcggtcacctgcatcatcgtgggcctgctcttc
ccgctcttctccctctgctacctgatggcgcccaagagcccgctggggctcttcatccgc
aagcccttcatcaagttcatctgccacacggcctcctacctcaccttcctcttcctcctc
ctgctggcctcgcagcacatcgcctcgctggacgacgacacgctggccgacaggcagggc
ccggcgcccaaccccgtggagtggatgatcctgccctgggttttaggtttcatctgggct
gagattaagcagatgtgggatgggggctttcaggattacatccacgactggtggaatctg
atggactttgtcatgaactccctttatctggccaccatctctttgaagatcgttgcgtac
cacaggtacgctggcacgaaggtgcccaggtgccagtgggagatgtggcaccccacgctg
gtggccgaggcgctcttctccatcgccaacatcttcagctcgctgcggctcatctcgctc
ttcacggccaactcgcacctgggcccgctgcagatctcgctgggccgcatgctgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacggcctcaac
cagctctacttctactacgagacggacgccgagaacgagaaggacaagtgcaagggcatc
cgctgcaaggagcagaataacgcgttctccacgttgtttgagactctgcagtctctgttc
tggtctgtgtttggcctcatcagcttgtatgtcaccaatgtcaagccagaccatgagttc
accgagtttgttggcgcgaccatgtttggaacttacaacatcatctccctggtggttctt
ctgaacatgctcattgccatgatgaacaattcctaccagcacatcgctgatcatgctgac
atcgagtggaagtttgccaggactaagctatggatgagttactttgaagaaggggggacc
cttcctcctccgttcaatatcatccccagcgcaaagtccctctggtacctctttaagtgg
atcaagaggcacctctgcagtaagaaacatgtcgaaaggacagagacttttcagtcaatt
gggagacgcgccgctgagaacctgcgaatcaatcaccagtaccaggaagttctcaggaat
ttggtgaagagatatgtggctgccatgatcagggatgcaaagaccgaggaaggactaaca
gaagagaattttaaggagctgaagcaggacatatccagcttccgatatgaggtgctcggc
atgctgaaaggtgtcaaaccaggcatgcaggcagtcaaaggaggcgctgggtcctcgagc
ctgccgtttcccgagcagcctcgcaggggttctgcggcggcggtgtccaccgggcagctg
aagagcaaactcaacctgctgaccgccgcctccgcactgcagcaacaggggggcgccaga
ccggctccgcggccgacggagaccctcggccgcctggccaacggctccgtcccccgcctg
gcggctctttcctccgcggccaccgtggaggaagaggaggaggaaccggaaccggaacag
caatcgcgagggaacagcgcctcggaccgcggtccgggcgtgaatctgcagctgcgccac
cggagcacgggccagtcgcggatctactccgtgtccgaggaggtggacgagaggcgcgac
agcggcgccgagccgtcgtcatctttgtcgccgccgccgacgtcatcgtcgtcgaggaac
agggacagtgacgaagatggggatgcgggcgccgtggtggagaccgcgcggccttccagc
agcgggagaaaaaaggatgaaaggaaagactcgcagacggagggagagccgaaggaggat
gaagacggagccaaatag
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