Sardina pilchardus (sardine): 134080008
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Entry
134080008 CDS
T10667
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03320
PPAR signaling pathway
spil04120
Ubiquitin mediated proteolysis
spil04137
Mitophagy - animal
spil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134080008 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134080008 (ubb)
04137 Mitophagy - animal
134080008 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134080008 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134080008 (ubb)
Ubiquitin system [BR:
spil04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134080008 (ubb)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
134080008
NCBI-ProteinID:
XP_062392181
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All DBs
Position
5:7436689..7439389
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AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacccttacagggaagacgatcacccttgaggtggagccaagt
gacaccattgagaatgtcaaggccaaaatccaggacaaagaaggcattcccccagaccag
cagaggttgatcttcgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtttgaggggaggcatgcagatcttc
gtcaagaccctgacggggaagaccatcaccctcgaggtggagcccagcgacaccattgag
aacgtgaaggccaaaatccaggacaaagaaggcattcccccagaccagcagaggttgatc
ttcgccggcaagcagctggaagatggtcgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctg
acggggaagaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaagcc
aaaatccaggacaaagaaggcattcccccagaccagcagaggttgatcttcgccggtaag
cagctggaagatggtcgcaccctgtccgactacaacatccagaaggagtccacactccat
cttgtccttcgtctgaggggaggcatgcagatcttcgtcaagaccctgacggggaagacc
atcaccctcgaggtggagcccagcgacaccattgagaatgtgaaagccaaaatccaggac
aaagaaggcattcccccagaccagcagaggttgatcttcgccggtaagcagctggaagat
ggtcgcaccctgtccgactacaacatccagaaggagtccaccctccatcttgtccttcgt
ctgaggggaggcatgcagatcttcgtcaagaccctgacggggaagaccatcaccctcgag
gtggagcccagcgacaccattgagaacgtgaaggccaaaatccaagacaaagaaggcatt
cccccagaccagcaaaggttgatcttcgccggtaagcagctggaagatggtcgcaccctg
tccgactacaacatccagaaggagtccaccctccatcttgtcctgcgtctgaggggaggc
atgcagatcttcgtcaagaccctgactgggaagaccatcaccctcgaggtggagcccagc
gacaccattgagaacgtgaaggccaaaatccaggacaaagaaggaattcccccagaccag
cagaggttgatcttcgccggcaagcagctggaagatggtcgcaccctgtccgactacaac
atccagaaggaatccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctgacggggaagaccatcaccctcgaggtggagcccagcgacaccattgag
aacgtgaaggccaaaatccaggacaaagaaggcattcccccagaccagcagaggttgatc
ttcgccggcaagcagctggaagatggtcgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctg
acggggaagaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggcc
aaaatccaggacaaagaaggcattcccccagaccagcagaggttgatctttgccggcaag
cagctggaagatggtcgcaccctgtccgactacaacatccagaaggagtccaccctccat
ctcgtccttcgtcttagagggggacagtaa
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