KEGG   Sardina pilchardus (sardine): 134088340
Entry
134088340         CDS       T10667                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134088340 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spil03041]
    134088340 (sf3a1)
Spliceosome [BR:spil03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    134088340 (sf3a1)
 Complex B
    134088340 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    134088340 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 134088340
NCBI-ProteinID: XP_062398240
LinkDB
Position
8:481355..499937
AA seq 802 aa
MPPGPVQIVQPEPNNKPEEAVVKDDTPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEF
EARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQAMQQSSQ
QLPQKVQAQVIQESVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLM
QKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLLKLKKEAENPREVMDQVRYR
VEWAKFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGA
RLLIQERYEKYGESEEVEMEVESEDEDDEREDRDEGHATQPDQDTQLQDMDEGSDEEDDG
MKAPLPPDNPMPPPLPPTPDHVIIRKDYDPKASKPQPSVVAPDEYLISPITGERIQASKM
QEHMRIGLLDPRWLEQRDRSLRERQVEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIG
KKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDAKDKI
GPSKPSDGPPQGGMLPTPSIPPSMPKPPSASAPRTTHTMSQPVRTTLLSAVPVLPRPPMA
PVVRLAPGQVLAPMPPMLHTHTHTHTHAHAPRINVVPMPPSGPHIMTPRPPPMVVPTAFV
PAPPVPQPPSSSAAPLPPAHPPPPHEDEPVSKKMKTEDNLIPEEEYLRRNKGPVTVKVQV
PNMQDKTEWKLSGQILSFTVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLA
YYNMSNGSIIHLALKERGGRKK
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtacaaattgtccagccggagcccaacaataagccagaagaggct
gttgttaaagatgacactccagcgacgaagcccatcgtcgggatcatctaccctcctccc
gaggtccgaaacatcgttgacaagacggcgagtttcgtagccaggaatggaccagagttt
gaggccaggatccgtcagaacgagatcaacaaccccaagttcaacttcctgaaccccaac
gacccttaccatgcctactaccgccacaaggtcaacgagttcaaggagggcaaggcccag
gagccgtctgcggccgtgcccaaggtcatgcagcagcaggccatgcagcagtcctcgcag
cagctgccacagaaggtgcaggcgcaggtgatccaggagtcggtggtgccgaaggagccg
cctccagagttcgagttcatcgccgacccgccgtccatctcggcctttgacctggacgtg
gtcaagctcacggcccagttcgtggcgcgcaacggacgccagttcctcacgcagctcatg
cagaaggagcagcgcaactaccagttcgacttcctgcgcccgcaacacagcctcttcaac
tacttcaccaagctcgtggagcagtacaccaaggtgttgatcccccctaaaggtctcctg
ttgaagctgaagaaggaagctgagaacccacgagaggtcatggatcaggtgcgctaccgc
gtggagtgggcgaagtttcaggagcgcgagcgcaagaaggaggaggaggagcgggagaag
gagcgcgtggcgtacgctcagatcgactggcacgacttcgttgtcgtggaaaccgtggac
ttccagcccaacgagcaaggtaacttcccccctcccaccaccccggaggagctgggcgct
cggctgctgatccaggagcgctacgagaagtacggcgagagcgaggaggtggagatggag
gtggagagcgaagacgaggatgacgagcgcgaagaccgcgacgaaggacacgccactcag
cccgaccaggacacccagctgcaggacatggacgagggttctgatgaggaggatgacggc
atgaaggctccgctgcccccagacaaccccatgcccccccctctgccccccacccccgac
cacgtcatcatccgcaaggactacgaccccaaggcgtctaagccgcagccgtcggtggtg
gccccagacgagtacctgatctcccccatcacgggcgagcgcatccaggccagcaagatg
caggagcacatgcgcatcggcctgctggacccgcgctggctggagcagcgcgaccgcagc
ctgcgcgagcgccaggtggaggacgaggtgtacgcgcccggcctcgacatcgagagcagc
ctgaagcagctggccgagaggcgtaccgacatcttcggcgtggaggagacggccatcgga
aagaagatcggagaggaggagatccagaagccagaggagaaggtgacgtgggacgggcac
tctggcagcatggcgcgtactcagcaggcggcgcaggccaacatcacgctgcaggagcag
atcgaggcgatccacaaggccaaggggctggtgcaggaggacgacgccaaggacaagatc
ggccccagcaagcccagcgacgggcccccgcaggggggcatgctgcccacgccctccata
ccaccctccatgcccaagccaccaagcgccagcgcgccacgcaccacacacaccatgtcc
cagccggtgcgcacgacgctgctgtcggcggtgccggtgttgccccgcccccccatggcc
cccgtggtgcgcttggcccccgggcaggtgctcgcccccatgccccccatgctgcacaca
cacacacacacacacacacacgcacacgcgccgcgcatcaacgtggtgcccatgccaccc
tccggaccccacatcatgaccccgcgacccccgcccatggtggtgcccacagcatttgtt
ccggccccccctgttccgcagccccccagctcctcagctgcccccctcccccccgctcac
ccccctcctcctcacgaggacgagcctgtcagcaagaagatgaagaccgaggacaacctc
ataccagaggaggagtacctacgcagaaacaagggtcctgtcacagtgaaagttcaggtc
cccaacatgcaggacaagaccgaatggaagctgagtggacagatcctcagtttcaccgtg
cccctcacagaccaggtgtccgtcatcaaggttaagatccacgaggccacaggaatgcct
gctggcaagcagaagctccagtacgagggcatcttcattaaagactccaactctctggcg
tactacaacatgagcaacggctccatcatccatctggccctgaaggagagaggaggcagg
aagaagtga

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