Sardina pilchardus (sardine): 134095935
Help
Entry
134095935 CDS
T10667
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
spil Sardina pilchardus (sardine)
Brite
Membrane trafficking [BR:
spil04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
134095935 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134095935
NCBI-ProteinID:
XP_062405631
LinkDB
All DBs
Position
11:521515..571156
Genome browser
AA seq
1351 aa
AA seq
DB search
MANCYLCVCVSRCLSLSDICPADYDILRRVSDLDTGNDIMTTGLEGEGGEKWSRRSTVSL
AKGERFSPDVVLVFSGVHRCTGEGDAELQEALRTRLRVLESSSHDISSLFKDLSARLLSV
HAEGDCFTLTFKTVEEIWKFSTYLSLGYVARCLENFLCDPSFWLDPALLSDVEICVSLQE
EHLATLYLGLLLQEGVFFAKAVCALEADGDDERLECVCDALLLVRDVGQEDLWEATLLTT
GDRGLVPSTSTQPLPYPFYQWFLRKYPCSANGLPSDTPLSQHPIATGTVVAVVDYEPVDA
DELALQEGEELAVQGFLLQGLDLFVGRSLTSGLTGFVHKEHVRPGDLKPTSPELQFMTEE
EREDLYQLEPALTHTHTHLLKQLSASDIRTVYRMDKLDESDFTYIKSTPKPDPQASSMRH
GLDSAPPRQSGTWPRPHSLAASQRSLGRSVRSVCGVGESFSANETFREAEPLEDDAPSWE
ELSEWEEESCEELLRLLDTPTLLEEEELSEAPLRWLQRVCVCVCVCEQDSACVCVCERVL
LRRLECVREAAKQRGCVWALRRVCFLLGRVCESATRLSQARVYYEEAVCVCVSGFSDPPL
LTALYTHLGGLYLHLRQREKLTHTHTLTRAAALLLTQPRPRISSAYQLNMLQPILCQALL
LGQRALEGRVCFLWVRMLLQLGRHDDALPFLERLQFLIGSLRAGACPGAGPDLNWLLSVL
YHRRYQPHLALAALSLDSAPSRGLGHALMRLHLHLRSSERLHASGVHTHTHTHTHTHTHS
SIPTQALVYLKQALTIASQEGHLQEQRELCISLAWVYLHHGVLQEAVLSAEQAVEAGSRL
GEEEEFEARALHGWLLVLVGGAESARAELTPLLMSLQGSDSPASKGVVHTLLALTLRRRG
NVRQAGTHLVAALRLAQESGHAHNQAVALSNLGCLALGAGAVGVAEGFLRRSLRLFQQLG
GGADQELVQSLLWMGRSYSGSGQGLKAQLANETALLIAIHAKNIHSQMVVAKVLSRHYAN
QMLYGQSIIYYEHCVALARQLRDKRLEGEFLEILGNLYLSINTQRSSLRSLDCTKQSLRI
CIDLGKRREEAESWLHAARIYHLLQEEELTDMYLQAAVRTALRVEDPIFDASIYEEAGDI
FYKGHRHQLKALPYYRDGSLPFARSTGDLQCEFRLLSKVTELLMSQNQHQEALQYALLAV
QNSAATGVRLHERVAFQRLACVYEALGQWELAENYFLKCVSLGPELTHSSDARYYCTLYT
HLAHITLHKLKDAWDAMGYYQLALAGALQAGDVSCVYVLLMKLAELHNTLLPNTHLHQHY
THTAQHYTHTPHTPHTAHTAHTAHTPHTTSC
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgctatctgtgtgtgtgtgtgagccgatgcctctcactctcagacatctgt
ccagctgattacgatattctgaggagagtcagtgatttagacaccggcaatgacatcatg
accacagggctggaaggtgagggaggtgagaagtggagtcgccggagtacagtgtctcta
gctaaaggggagcgcttctctccagatgtggtgctggtgttcagtggggtgcacaggtgc
acaggtgagggggacgctgagctgcaggaggcgctgaggacccgactgagagtcctggag
agcagcagccacgacatcagcagcctgtttaaggacctctctgcccgcttgctgtctgta
catgctgagggagactgcttcactctgaccttcaagaccgtggaggagatctggaaattc
tccacctacctctccttaggatacgtggcgaggtgtttggagaacttcctgtgtgatcca
tccttctggttggaccctgcgttgctaagcgacgtggagatctgtgtgtccctccaggag
gaacacctggcaaccctctacttgggccttctgctgcaggagggagtgttctttgctaag
gcggtgtgtgcgctggaggcggatggcgatgacgagcgtctggagtgtgtgtgtgacgcg
ctgctgctggtcagagatgtggggcaggaggacctgtgggaagccaccctgctgaccacc
ggagaccgcggcctcgtgccctccaccagcacacagcccctaccctaccccttctaccaa
tggtttctaaggaagtacccctgcagtgccaatggactcccctcagacacgcccctcagt
caacacccaatagcgacgggcacggtggtggcagtggtggactacgagcctgtggacgct
gacgagctggcgctacaggaaggggaggagctagcggtgcagggcttcctgcttcagggg
ctggacctcttcgtggggcggagcctaaccagcggcctcacaggattcgtccataaagag
catgtgagaccaggagacctgaaacccacgagtccagagctgcagtttatgactgaggag
gagagagaagacctctatcagctggagcctgcgctcacacacacacacacacacctcctg
aaacaactcagtgcctcagacatccgcactgtctacagaatggacaaactggatgaatct
gacttcacatacatcaaaagtactcctaaaccagaccctcaggccagctccatgcggcat
ggtttagactccgccccaccgcgtcagtctgggacttggccccgcccccactccctcgcc
gcctcccagaggtctctggggcgttccgtgcggagtgtgtgcggcgtgggcgagtccttc
agcgccaacgagaccttcagggaggcggagcctctagaggacgacgccccttcgtgggag
gagctatcggaatgggaggaggagtcatgtgaggagctgctgaggctgctggacacgccc
actttactggaggaggaggagcttagcgaggctccgctgcgctggctgcagcgtgtgtgt
gtgtgtgtgtgtgtgtgtgagcaggacagcgcgtgtgtgtgtgtgtgtgagcgcgtgctc
ctgcgcaggctggagtgtgtgcgcgaggcggctaagcagcgcgggtgtgtgtgggcgctg
aggagagtgtgtttcctgctgggccgtgtgtgtgagagcgccaccagactgtcccaggcg
cgcgtctactacgaggaggccgtgtgtgtgtgtgtgtcgggcttcagcgacccgccgctg
ctcacggccctctacacacacctgggcgggctgtacctgcacctgaggcagcgcgagaag
ctcacacacacacacactctcacgcgtgccgccgccctcctcctcacacagccacgcccc
cgcatcagctcggcctatcagctcaacatgctgcagccaatcctgtgccaggccttgttg
ctggggcaacgggcgctggaggggcgtgtctgcttcctgtgggtgcgcatgctgctgcag
ctggggcgccatgacgacgcgctgcccttcctggagcggctgcagttcctgattggctcc
ctccgtgcaggggcgtgtccaggggcggggccagacctcaactggttactcagcgtcctg
tatcaccgcaggtatcagcctcacctggctcttgcagccctcagtttggactccgccccc
tcccgtggattaggccacgccctcatgcgactgcacctgcacttgcgcagctcagagcgg
ctgcatgccagcggcgtccacacacacacacacacacacacacacacacacacacactcc
tccatccccacacaggcgctggtgtatctgaagcaggccttgaccatcgcctctcaagag
ggacacctgcaggagcagagagagctgtgtatcagcctggcgtgggtgtaccttcatcac
ggggtgctgcaggaggcggttcttagcgcggagcaggccgtggaggcggggtctcgtctg
ggggaggaggaggagtttgaggcgcgcgcgctccacggttggctgctggtgttagtgggc
ggggctgagagtgcgagggcggagcttacccccctgctgatgtcactgcagggttccgat
agccccgcctccaaaggcgtggtccacaccctgctggcgctcacgctgcgtcgccgtgga
aacgtgcgccaggcgggaactcatctggtcgccgcgctgaggctcgcgcaggagagtgga
cacgcccacaaccaggccgttgcccttagcaacctgggttgcctagcgctgggggcaggt
gcggtgggcgtcgccgagggcttcctgaggaggtcgctccgcctcttccagcagctaggg
ggcggggctgaccaggagctcgtacaatcgctgctgtggatggggaggagctacagcggc
agtgggcagggcctcaaagctcaactagccaatgagacggctctgctgatcgccatccac
gccaagaatatacacagtcagatggtggttgctaaggttctgagtcgtcactatgctaat
cagatgctctatggtcagagcatcatctactacgaacattgtgtggcgttggcacggcaa
ctacgagacaagcggttggagggagagtttctcgagatcctggggaacctctacctgtca
atcaacacccaacggtcttctctgaggtctcttgactgcactaaacagtctctgaggatc
tgcattgatttggggaagcggcgggaggaggcggaatcttggctgcatgcagcgcgaata
taccacctgctgcaggaggaggagcttactgacatgtacctacaggcagcagtaaggaca
gctttgagagttgaggaccccatcttcgatgccagtatttatgaggaggcgggagacatc
ttttacaaaggacatcggcaccagctcaaagcactaccttactacagggacggcagtctc
ccgtttgcgcgcagtactggggacctgcagtgtgagttccggctgctgagtaaagtgacc
gagctgctgatgagccaaaaccaacaccaggaggcgctgcagtacgctctactagccgtg
cagaacagcgcagccacaggggtgcgtctgcacgagcgtgtggcgttccagcgtctggcg
tgtgtgtacgaggcgctgggccagtgggagctggcggagaactacttcctgaagtgtgtg
tccctgggccccgagctcacacacagcagcgacgcccgctactactgcacgctctacaca
cacctcgcccacatcacactccacaaactcaaggacgcgtgggatgccatgggctactac
cagctggcgttggcgggcgctctgcaggcgggcgacgtgtcgtgtgtgtacgtcctgctg
atgaagctggcagagctgcacaacacactcctgcccaacacacacctgcaccagcactac
acacacaccgcccagcactacacacacacacctcacacacctcacacagctcacacagct
cacacagctcacacaccacacactacgtcctgctga
DBGET
integrated database retrieval system
