KEGG   Sardina pilchardus (sardine): 134099223
Entry
134099223         CDS       T10667                                 
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 3-like
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spil04121]
    134099223
Ubiquitin system [BR:spil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     134099223
SSDB
Motif
Pfam: WD40_Prp19 Bromodomain WD40 WD40_WDHD1_1st C1_1 WD40_CDC20-Fz EIF3I Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12 C1_2 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 134099223
NCBI-ProteinID: XP_062407998
LinkDB
Position
13:25214759..25287388
AA seq 2724 aa
MANASPCLSSGPLAHPVFFPPGGGPSPPGSVVMQHGPPMAIPPGAAVSGFPPSLDMGVGV
TQGPGGVGAMSPVLPVPIGVSFIIQIGLTRESVFLPQTADLAYVKQIACSIVDQKFPECG
FYGMYDKILLFKHDTGTNNILQLVKAASDIQEGDLVEVVLSAAATFEDFQIRPHALNVHS
YRAPAFCDHCGEMLFGLVRQGLKCDGCGLNYHKRCAFSIPNNCSGARKRRLSTTSLTSTQ
SMRLTTSESLSTVSTSTTTTSEETNLVRSHTQMPRTPSEARRFTCRPVHLDKMLMSKVKV
PHTFAVHSYTRPTVCQYCKRLLRGLFRQGLQCKDCKFNCHKRCAYKVPNDCLGETIDILS
PSADTEVPMDYSSEYADSDKSSLMDDSDEACSIPGSFSPDSGQDGSSGDQRSGQHTRGSD
DCLVKIWSSFDGRLHSTLRGHSAEISDLAVNFENTLIAAGSCDKTIRVWCLRTCAPVAVL
QGHTGSITSLQFSPFAKGSKRYMVSTGTDATVCFWQWDVNNINFSERPHKFTERPRPGVQ
VVCSSFSPGGMFLATGSTDHVIRIYYLGCGNPEKVSELSDHTDKVDSIQFCHTGERFVSG
SGDGTARIWRLHHRQQWRSLLLDMSATLPSETVTVRGDLFFKAKVTMVSWDRHDNTVLTA
VNNYLIKVWNSYTGELLHILKGHEAEVFVLEPHPFDPRVMLSAGHDGSVYIWDLLKGTKT
QHYFNMIEGQGHGAVFDCKFTPDGQRFACTDSHGHLIIFGFGSSKPYEKLPDQVFFHTDY
RPLIRDANGFVLDEQTQQAPHLMPPPFLVDVDGNPHPPRYQRLVPGRENISDEHLVPQLG
YVATSDGEVVEQVISQQPGESVEVAVGRSALDQAIRVLQQNQDRGVLPLVPEGAVAPAPA
PLPAPGTPRRVSMNERMELQSSPNVGLRRSGQVEGVRQMHQNAPRSQMATERDLQAWRRR
VVVPELTNSTYRYQERYRTAKGEEETTLFNTRKRRIIHGGFRDDSDDEVACVKRVPSRKR
QWKDGEEFIEFSCEEGEETAASSEDHDMEGTENDSTNEEEWKSDSSSNSSGEYSDWMADA
GIKAHPTPPLSSRRRARRQLSSSEEEDEEEEEEDDDDAEEEEQTTQNEEEQTPHKPKKTK
SKAPKRPKARPSINREVSTEFRPSVWITDVVPRKSPFVPQLGDEVIYFRQGHEAYVEAVC
RNNLYPINLDKQPWKKMQLRDQEFVKITGIKYEVCPPTLCCLKLTLIDHGTGRTTDKSFS
IKYHDMPDVIDFLVLRQCYDDARNRVWQPNDRFRSVIDDCWWFGSIVCQEPYQLEYPDSH
FQCFKVKWDNGETEKLSPWDMEAIPENAQQPESEGGGVPVTGEEMIEVLYKPQTGEWGDR
PRDEECERVMGGIDQLITVDIAAPFSGPVDISQYPTYCTVIAYPTDLGTVRMRLQHRFYR
RVSALVWDIRHIFLNARTFNEPRSKIADSAKLITDALLKYISKPECTDIMEIYNALENLE
YSDEDMEADVPGTSSGHALRQTAAEPAPDPEAWKEQCRRLVNYIFECEDSEPFRHPVDPI
EFPDYADIIHSPMDFETVRNTIEQDRYENPIEFCKDIRLIFVNAKAYTPNKRSKIYSMTL
RLSAFFDERIRTIISDYKTAVKSSAKLRRSQRFRKRQQYQEPQVPGHGSTSNQKRAALKA
QEKVETSSTKSTSAKVTASERSSRSTRRRHGGRRSSTRTSSDDDDDEDSASKGASTTPES
ESESEMSLNDSEGQSQRSSRRHLRRDTRSSGLATRSRGSTHRRRRVAESESENEGRSVRS
YPGRSTRLRRKHTETSDRRRPETHAKMNGDDRASRLERRRRFNHINRQTSQESDIFTKDE
EEDEKEDDDDDDDDDESISRRPKTRKTARAAATRFKMLDASEEEDDEEEPKDSRRSSRNQ
GSRSSKRKAVLHSSSESEGQAPSQSESKNEESGSEEEKSDGSKESGVSSSRNGEGNGGSL
RPMRKSASKGRHDRQSHLNGHSSKHQAKSEENSDREASPGDSLDEDEGGLIVRRKLTRRT
AAAAASKIKNLNTSEAEEEEEEEEEEEEEEEEETPSRSRRQQGAPKTSEEEECDDEEVGD
AKFQKHPYQNGRKMRGDAEATSRSQEQTTSASHTHATKTPSDAAASRRTHRSDDLSSIPR
KSETRKKKIMSDDEEEDDGKQSDGEDETQANATDGDGAGKRRSSRKHDSSKEQEFSRSSQ
ESPSESVEEEEEEEDDDDDDDYKAKCKKSFKRKEASSDEWTDGGEKKAVSRRKPQLRSLP
KKKYITDDSEEDHLTEEGSHSRNGKDLTSDPKHLAKRKKEHQDKRGRSEATSVKREQTSA
SDTHTTKKPSGAAAASSTPAAESKDHSDVPRKGGLPKKKIISDDEEEEEDEEEEVEEEEE
EEEEEEGKQSSEEAEGGSQQSQTTEEDGTSKEQSSQSKNGSRRCDSRRHLGNSSRRVEKS
LSESEPRKSHKKKQASSSSSEWSHSKSEESEREEKISSSRKRLRALPKKKYVTDDSEDDV
EAGNSRNGKGLTSDSKRRAKRKRHRGSEDSGDHHRSHGKRRKSRDQSESENDDEDHRKRK
TSKSTSSRGSLKEPKGRLLSEEEEEEEAEERSKSRHGQRREHRSQRLKRKRGGSSPESEE
EEDEEEEEEEEEESGTELSSSSSGSGSASKRRTRKRQPESKRRSHRRGSDSDADSDYDDR
KSKRASKVRTRNRGKRTVTYNDSE
NT seq 8175 nt   +upstreamnt  +downstreamnt
atggccaacgctagcccctgcctgtcctcggggcccctggcccacccggtcttcttcccc
cccggcgggggtccctctcccccgggctccgtggtcatgcagcacggcccccccatggct
atacccccgggggccgccgtctcggggttccccccgtcgctggacatgggagtgggggtg
acccagggccccggaggagtgggcgccatgtcgcccgtgctgcccgtgcccatcggggtc
tcgttcatcatccagatcggactgacccgcgagtccgtctttctgccgcagacggctgac
ctggcctacgtcaagcagatcgcctgctccatcgtggaccagaagttccctgagtgtggt
ttctacggcatgtatgataagatcctactcttcaagcatgacacgggcaccaacaacatc
ctgcagctggtcaaggcagcttcggacatccaggagggtgatctggtagaggtggtgctc
tcagcggcggccacctttgaggacttccagatccgcccccacgcgctcaacgtgcactcc
taccgggcgccggccttctgcgaccactgcggcgagatgctgttcggcctggtgcggcag
ggcctcaagtgtgacggctgtgggctgaactaccacaagcgctgtgccttcagcatcccc
aacaactgcagtggggcgcggaagcggcgtctgtccactacgtcgctgaccagcactcag
tccatgcgtctgaccaccagcgagtcgctcagcacggtcagcaccagcaccaccaccacc
tcggaggagaccaacctcgtacgctcacacacacagatgcctcggaccccgagcgaggcg
cggcgcttcacctgccggccggtgcacctggacaagatgctgatgagcaaggtgaaggtg
ccgcacaccttcgctgtgcactcctacacgcggcccaccgtctgccagtactgcaagcgt
ctgctccgaggactcttcagacagggcctccagtgcaaagactgtaaattcaactgccac
aagcgctgtgcctacaaggtgcccaacgactgcttaggagagaccatagacatcctgagt
cccagtgcggacactgaggtgcccatggactacagtagcgagtacgccgactctgataag
tcctctctgatggacgactcggacgaggcctgcagcatccccggctcattctcccccgac
agcggacaggacggaagcagcggggaccagaggtcaggacagcacacgaggggctcagac
gactgtttggtgaagatctggtcgtctttcgacgggcggcttcactctacgctgcggggc
cactcggccgagatctcggacctggccgtgaacttcgagaacactctgatcgccgccggc
agctgcgacaagaccatccgcgtgtggtgccttcggacctgcgctcctgtggctgtgctg
caggggcacacgggctccattacctcgctacagttttctccatttgccaagggctcaaaa
cgatatatggtatccacgggtactgatgcaacagtctgcttctggcaatgggatgtaaat
aatatcaatttcagtgaacggccacataagtttacagagcgaccccggcctggcgttcag
gtggtttgctcctcctttagcccaggtggcatgtttttagcaacgggcagcacagaccat
gttatcagaatatattacctgggatgtggcaatccagagaaagtatctgaattatctgac
cacacggacaaagtggacagcatccagttctgtcacacaggagaaaggtttgtgagtggc
agcggagatggaacggcacgaatctggcggctgcatcatcggcagcagtggcggagcctt
cttctggacatgagtgccactctgccgtctgaaactgtaacagtaaggggggacctcttc
tttaaggccaaggttaccatggtgtcctgggatcgacatgacaacacggtcctcaccgct
gtcaacaactatctgatcaaagtgtggaactcgtacacaggagagctgctacatatcctg
aagggtcacgaggccgaggtgtttgtactggagccgcaccccttcgaccccagggtcatg
ctgtccgccggccacgacggcagcgtctacatctgggacctcctgaaaggcacaaagaca
cagcactacttcaatatgattgagggccagggccatggcgccgtctttgactgcaagttc
acgccggacggacagcgcttcgcctgcaccgactcccacggccatctcatcatcttcggc
ttcgggagctccaagccctacgagaagctaccagaccaggtgttcttccacacggactac
cggccgctgatccgcgatgccaacggcttcgttctggacgagcagacgcaacaggcgccc
catctcatgcccccgcccttcctggtggacgtcgacggcaacccgcacccccccaggtac
cagcgcctggtgccaggccgggagaacatctccgacgagcacctggtcccacagctgggc
tacgtggccacaagtgacggggaggtggttgagcaggtgattagccagcagccgggcgag
agtgtggaggtggcggtgggtcggagtgctctggaccaggccatccgggtcctgcagcag
aatcaggaccggggcgtcctgccgctggtgcccgaaggagctgtggcaccggctcctgcc
cccctaccagcccccgggactccccgcagagtgtctatgaacgagcgcatggagctgcag
tcgtcccctaacgtgggcctgcggcggagtggccaggtggagggggtgcggcagatgcac
cagaacgccccccgcagccagatggccaccgagagggacctgcaggcctggcgccgccgc
gtggtcgtgcccgagctcaccaacagcacctaccggtatcaggagcgctaccgcacggcc
aaaggcgaggaggagaccacgctcttcaacaccaggaagcgccgcatcattcatggcggt
ttcagggatgactcggacgacgaggtggcttgtgtgaagcgggttccgtctcgcaagcgc
cagtggaaggacggggaggagtttatcgagttttcctgcgaggagggcgaggagacggcc
gcgagctctgaggaccatgacatggagggcactgaaaacgactcgaccaatgaggaagag
tggaagagcgacagctccagcaactcatctggcgagtattccgattggatggctgacgcc
ggcatcaaagcgcatcccacacccccgctgtcgtcacggagacgggcgcgacgccagctc
agcagctcggaggaagaggatgaggaggaggaggaggaagatgacgatgatgccgaggag
gaagagcagacgactcaaaacgaagaggagcaaacacctcacaaaccgaagaagaccaag
agtaaagcacccaagcgtcccaaagctcggccatccattaacagggaagtgtccactgag
ttccggccctctgtctggatcactgacgtcgttcccaggaagtctccattcgtcccgcaa
ttgggagatgaggtgatctatttccgtcagggccacgaggcctatgtggaggcggtgtgc
aggaataacttgtaccccatcaacctggacaagcagccctggaagaagatgcagctgagg
gaccaagagtttgtgaagatcacaggcatcaagtacgaggtgtgtcctcccaccctgtgc
tgcctgaagctcacgctgattgaccacggcacgggcaggaccacagacaagtccttctcc
atcaagtatcatgatatgccagatgtgattgacttcttggttctgcggcaatgctatgac
gacgcacggaacagagtgtggcagccaaacgatcgtttccgctccgttatcgatgactgc
tggtggtttgggtccatcgtgtgtcaggagccgtaccagctggagtatcccgacagccac
ttccagtgcttcaaagtcaagtgggacaatggggagactgagaagctgagcccatgggac
atggaggccatcccagagaacgcccagcagcccgagtctgaggggggaggtgtgccagtt
accggagaggagatgattgaagtgctctacaagccccagacaggagagtggggcgacaga
ccgcgcgacgaagagtgtgaacgcgtcatgggtggcatcgaccagctcatcaccgtggat
atcgctgctccgttctctggcccggtggacatcagccagtaccccacgtactgcacggtc
atcgcgtaccccacggacctgggcacggttcgcatgaggctccagcatcgcttctacagg
cgagtttctgcactagtctgggacatccgacacatattcctcaacgccaggaccttcaac
gagcctcgcagcaaaatcgccgactctgccaaactcatcactgatgccctcctcaagtac
attagtaagccagagtgcacagacatcatggagatctacaacgcactggagaacttggag
tactctgatgaggatatggaagcagacgtgcctggaacatcatctggacatgctctgcgt
cagactgcagcagagcctgctcctgatcccgaggcgtggaaggagcagtgcaggcgcctg
gtgaactacatattcgagtgcgaggactcggagcctttccgccaccccgtggaccctata
gaattccccgattatgcagacatcattcactcaccgatggatttcgaaactgtgcgaaat
accatagaacaggaccgatacgaaaaccccattgaattttgcaaagatattcgtcttatc
tttgtcaatgcaaaagcctacacaccaaacaagcgctcaaagatctacagtatgactctg
cgcctctctgcgttcttcgacgagcgcatcagaacgatcatatcggattacaagacggcg
gtgaagagcagcgccaagctgcgtcgcagccagaggttccgcaaaaggcagcaataccag
gaaccccaggtgccgggccacggatccaccagcaaccagaaaagggctgctttgaaagct
caggaaaaggtggagacgtcttcaaccaaatctacctcagccaaagtgactgcgtcggag
aggagcagtaggagtacgcgccggcgacacggaggacgcaggtcctccacgcgcacgtct
tctgacgacgatgatgacgaggactctgcatccaaaggagcctccaccactccggagtcg
gagagtgagagtgaaatgagtctaaacgactccgagggccaatcgcagcgttcgtctcga
cggcatctcaggagggacactcggtcatcaggccttgccacacggagccgagggagcacc
cataggaggaggagggtggcagagagcgagagcgagaacgagggccggtctgtgaggagc
taccccggcagaagcaccaggctgagaaggaaacacacggagacctcggaccggaggcgg
ccagagacccacgctaagatgaatggtgatgacagagcctcacgcctggagagacgaagg
cgtttcaatcacatcaaccgccagacctctcaggaatctgacatcttcaccaaagacgag
gaggaagacgagaaggaggatgacgacgatgatgatgacgacgatgagtcaatatcccgc
agacccaaaacgaggaaaactgctcgcgcagctgccactaggtttaagatgcttgatgcc
tcggaagaggaggatgacgaggaggaaccgaaggacagcaggagatcaagcaggaaccag
gggtctcgctccagcaagcgcaaagcagtactgcacagcagctcggagtcagagggccag
gcaccttcacagagtgaaagtaagaatgaagagtctgggagtgaggaggagaagagcgat
ggcagtaaggagagtggtgtctcatcgagtcggaatggagagggaaacggagggagcctt
cgaccaatgaggaaaagtgcctccaagggtcgccatgaccgtcaatcacacctgaatggc
cacagtagtaaacatcaggcaaagagtgaggagaactccgaccgagaggctagtcccgga
gacagtttggatgaagacgagggcggtctcatcgttcggcggaagttaactagaagaacg
gcagctgctgccgccagcaaaataaaaaatctgaacaccagcgaggctgaagaggaagag
gaagaggaagaggaagaggaagaggaagaggaagaggaaaccccttccaggagcaggcga
cagcagggagcccccaaaacctctgaggaagaagaatgtgatgacgaagaggttggagat
gcaaaattccagaagcacccttaccagaacggacggaagatgagaggagatgccgaagcc
acttcaagaagccaagaacaaacaacatctgcctcacacacacatgccaccaagacacct
tctgatgccgctgcctcacgacgcactcataggtcagacgacctcagcagcattcccagg
aaaagtgagacacggaaaaagaaaatcatgtctgacgacgaagaggaagatgatgggaaa
cagtcagacggagaagacgagacccaagcgaacgccacagatggggatggagccggtaaa
aggaggtcgtcacggaaacatgattcgagcaaggagcaggagttctcaagaagttcacaa
gagtccccatctgaaagtgtggaagaggaggaggaggaggaggatgatgatgatgatgat
gattataaggcaaagtgcaaaaaaagcttcaagaggaaggaagcttcatcagatgagtgg
actgacgggggggaaaagaaagcagtttccaggcgaaaaccacaactgagatcactgccc
aagaagaagtatattactgacgactctgaagaagaccacctcactgaagaaggcagtcac
tcaaggaatggcaaggacttgactagtgacccaaagcatcttgccaaacggaaaaaagag
catcaagacaaacgaggaaggagtgaagccacctctgtaaaacgagaacaaacatctgcc
tcagacacacataccaccaagaaaccttctggtgctgctgctgcaagctcaacacctgct
gcagaatctaaagaccatagcgacgttcccaggaagggaggattgcccaagaagaaaata
atctctgatgatgaggaggaggaggaggatgaagaggaggaggtagaggaggaggaggag
gaggaagaagaagaagagggaaaacagtcctccgaagaggcagaaggagggagccagcag
agccaaaccactgaagaagatggtaccagcaaggagcagtcttcacagagcaagaatgga
tccagaagatgtgactccagaaggcatcttgggaattccagtaggagagtagagaagtcc
ctctctgaaagcgagccaagaaaaagccataagaaaaagcaagcctcctcttcctcctcc
gagtggtcccacagcaaaagcgaagagtctgaacgggaagagaaaatctcgtctagccga
aaacgcctgagggcattacctaagaagaagtatgtaaccgacgactcagaggacgacgtg
gaggcaggtaactcgaggaacggtaagggcttgaccagtgactcaaagcgtcgagccaaa
cggaaacgtcaccgaggctcagaagactcaggagaccaccatagaagccacggcaagagg
cggaagtcgagggaccagtcagagagcgagaatgatgacgaagaccatcgcaaacggaaa
acgtcaaagtcaacatcatccagaggttccttgaaggagcccaaagggaggttgctctct
gaggaggaggaagaagaggaggcggaggagaggagcaagtctcgacatggccagaggaga
gaacataggtcgcagagactcaaacggaaacgtggtggctccagccctgagagtgaagag
gaagaggatgaggaggaggaggaagaagaagaagaagagtcaggcactgagttgagctcc
tccagctccggctcagggagtgcttctaaaaggcgaacgaggaaacggcagccagagagc
aagaggagatcccaccggagaggcagtgactcggatgcagacagtgattacgatgaccgg
aaatccaaaagggcctctaaagtccggaccagaaaccgtgggaagagaactgtgacctac
aatgatagtgaatga

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