Sardina pilchardus (sardine): 134099748
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Entry
134099748 CDS
T10667
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134099748
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134099748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134099748
Spliceosome [BR:
spil03041
]
Common components
Common spliceosomal components
SR proteins
134099748
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
134099748
NCBI-ProteinID:
XP_062408719
LinkDB
All DBs
Position
13:13721247..13724829
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AA seq
248 aa
AA seq
DB search
MSGGSSVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFV
EFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGMGRGGFGGMGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSRSRSKSRSYSPRRGRGSPQYSPR
HSRSRSRS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggcagtagcgtgatccgaggcccagctgggaacaacgactgccgaatttat
gtggggaacctaccaccagatattcgcacaaaagacgtcgaagatgtgttctacaaatac
ggtgcaattcgagatatcgaccttaaaaatcgcagaggaggacctccatttgccttcgtc
gagtttgaggatccaagagacgctgaagacgctgtgtacggacgagatggctacgactac
gatggttaccgtcttcgagtggagtttcccaggagtggaaggggaatgggcagaggtgga
tttggagggatgggtggggcccccagggggcgctatggacccccgtccaggcgttcagaa
tacagagtcatagtttcagggcttccccccagtggcagctggcaggacctgaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtattccgcgatgggactggtgttgtg
gaatttgtgcgaaaagaagacatgacctacgccgttcgaaagctggacaacactaaattc
cgctcacacgagggtgaaactgcatatgtgcgagtgaaggtggatggcccacgcagcccc
agctatggaaggtcacgctcccgcagtcgtagccggagcaggagccgcagtcggagcagg
agcaagagccgcagctactccccacgccgcggccgcgggtctccccagtactccccgcgc
catagccgatcccgctcccgctcctga
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