Spirosoma pollinicola: CWM47_05145
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Entry
CWM47_05145 CDS
T05236
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spir03021
]
CWM47_05145
Transcription machinery [BR:
spir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CWM47_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_AsnC-type
HTH_40
HTH_24
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AUD01248
UniProt:
A0A2K8YUL0
LinkDB
All DBs
Position
1179705..1180256
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AA seq
183 aa
AA seq
DB search
MNAPLSDEDMIRRYLSSQPAHCFEALYNRYVNKVYRRCLSMTKDPLKAEDFTHDIFLKVF
HKLDAFQERSSFSTWLYSIAYNYCSDQIRLARRMHVTGIDENFKHDIPEVKEDYLHEETL
HLVNRAMESLSVSEQALLRLKYEDGMSIAAIGEACDLKESTVKMRLKRSRDKIYRLYEKM
YTA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccattaagtgacgaagatatgattcgacgatacctgtcgagtcagcctgcc
cactgttttgaggctctttacaatcgttacgttaacaaagtctaccgacgatgcttatcg
atgacaaaagatcccctcaaagctgaagattttacccacgacatttttttgaaggttttt
cacaaactggatgcctttcaggagcggtcaagtttctccacctggctttattctatagcc
tataactattgctcagaccagattcgattggcaagaaggatgcacgtcacggggattgac
gaaaatttcaaacacgacattcccgaagtaaaagaagattatctgcacgaagaaacgctt
catctggttaatagggctatggagtccctctctgtaagcgaacaggcattattgaggctt
aagtatgaagatggtatgagcattgctgccatcggcgaggcctgcgatttgaaagaaagc
accgtaaagatgcgcttgaaacgaagtagagataaaatttatcggctatatgaaaaaatg
tatactgcgtaa
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