Streptococcus pyogenes MGAS9429 (serotype M12): MGAS9429_Spy0083
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Entry
MGAS9429_Spy0083 CDS
T00358
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spk
Streptococcus pyogenes MGAS9429 (serotype M12)
Pathway
spk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGAS9429_Spy0083 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spk03021
]
MGAS9429_Spy0083 (rpoB)
03400 DNA repair and recombination proteins [BR:
spk03400
]
MGAS9429_Spy0083 (rpoB)
Enzymes [BR:
spk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGAS9429_Spy0083 (rpoB)
Transcription machinery [BR:
spk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MGAS9429_Spy0083 (rpoB)
DNA repair and recombination proteins [BR:
spk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MGAS9429_Spy0083 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ABF31271
UniProt:
Q1JNX8
LinkDB
All DBs
Position
93952..96837
Genome browser
AA seq
961 aa
AA seq
DB search
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFEDVLPISNFTD
TMELEFVGYEFKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLV
DAETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPID
PDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRATGRVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHNGKVVFSDAEKVEIRRQDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPRVSFHVLYQLKTCHTFQTEHQLTS
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcgatacggaaaacaccgtacacgtcgtagcttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaattcaaactgactcattccaagatttc
ctcgattcaggtttgaaagaagtatttgaagatgtacttcctatttcaaactttacggat
actatggaacttgaatttgttggttacgaatttaaagaacctaaatatacccttgaagaa
gctcgtatccacgatgcaagttattctgcaccaatctttgttaccttccgtttggtcaat
aaagaaactggtgagattaaaactcaagaagtcttctttggtgatttcccaatcatgacg
gaaatgggtacctttattatcaatggtggtgaacgtatcatcgtttctcagttggtgcgt
tctccaggtgtttatttcaacgataaagttgataaaaacggtaaagttggttacggatca
acagtgattcctaaccgtggggcttggttggaattagagactgactcaaaagacattgcc
tacactcgtattgaccgtacccgtaagattccattcacaaccttggttcgtgcccttggt
ttctcaggtgatgatgaaattgttgatatctttggtgaaagcgaccttgttcgtaatacc
attgaaaaagacattcacaaaaatccaagtgattctcgtacagacgaagcccttaaagaa
atttacgagcgtcttcgtccaggtgagccaaaaactgcagatagctctcgtagtcttttg
attgcgcgtttctttgatgcacgtcgttacgatttggctgcggttggtcgttacaaagtg
aacaaaaaacttaatatcaagactcgtcttttgaaccaaatcattgctgaaaaccttgtg
gatgctgaaactggcgaaattttggtagaagctggaactgagatgactcgtagcgtcatc
gaatccatcgaagaacaccttgacggtgatttgaacaagtttgtttacacaccaaatgat
tacgctgtggttactgaacctgttgttcttcaaaagttcaaggttgtgtcaccaattgat
cctgatcgtgtagtaactattgttggtaatgccaatccagatgacaaggttcgtgcattg
acacctgctgatattttggcagaaatgtcttacttcttgaaccttgcagaaggtcttgga
aaagttgacgatattgaccacttaggtaaccgtcgtatccgtgccgttggtgaattgctt
gccaaccaattccgcatcggtcttgctcgtatggagcgtaacgttcgtgagcgtatgtct
gttcaagacaacgatgtgttaacaccacaacaaatcatcaatatccgtcctgtcacagca
gctgtcaaagaattcttcggttcgtctcagttgtcacaattcatggaccaacacaaccca
ttgtcagagttgtctcacaaacgtcgtttatctgccttaggacctggtggtttgacacgt
gaccgtgctggttatgaggttcgtgacgtgcattacacgcactatggccgtatgtgtccg
attgaaacacctgaaggaccaaacattggtttgattaacaacttgtcttcatttggacat
cttaataaatatggtttcatccaaacaccttaccgtaaggttgaccgtgcgactggtagg
gtaactaacgagattgtttggttgactgccgacgaagaagacgaatacacagttgcacag
gccaattcgaaactaaacgaagatggcacttttgctgaagaaatcgttatgggtcgtcac
caaggtaataaccaagaattttctgcaagtgttgttgatttcgttgacgtttcccctaaa
caggtagttgctgttgcgacggcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggaatatcaagctgcccatgactcaggcgctgcggtgattgct
cagcacaatggtaaagttgtcttttctgatgctgaaaaagtggaaatccgtcgtcaagat
ggctcacttgatgtttaccacattaccaaattccgtcgttcaaactcaggaacagcctat
aaccaacgcacccttgttaaagtaggagacattgttgaaaaaggtgatttcatcgctgat
ggaccttctatggaaaatggtgaaatggctcttggacaaaacccagtcgttgcttacatg
acttgggaaggttataactttgaggatgccgttatcatgagtgagcgccttgtgaaagaa
gatgtctacacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaaactt
ggccctgaagaaatcactcgggaaatcccaaatgttggtgaagaagccctcaaagacctt
gacgaaatgggcattatccgtatcggtgctgaggtgaaagaaggcgacatcttagtaggt
aaagtcacacctaaaggtgaaaaagacctttctgctgaagaacgtttacttcacgccatc
tttggggataaatcgcgtgaagtgcgtgatacctcacttcgtgtccctcatggtggtgat
ggtattgttcgtgatgtgaaaatctttacacgcgctaacggcgatgaattgcaatcaggt
gttaatatgcttgtgcgtgtttacatcgctcaaaaacgtaaaatcaaggtcggagataaa
atggccggtcgtcacggaaacaagggtgtcgtttcacgtattgtaccaagggtgtcgttt
cacgtattgtaccagttgaagacatgccataccttccagacggaacaccagttgacatca
tgttga
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