Sphingomonas sp. KC8: KC8_12505
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Entry
KC8_12505 CDS
T04987
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03030
DNA replication
spkc03430
Mismatch repair
spkc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KC8_12505
03430 Mismatch repair
KC8_12505
03440 Homologous recombination
KC8_12505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spkc03032
]
KC8_12505
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_12505
03029 Mitochondrial biogenesis [BR:
spkc03029
]
KC8_12505
DNA replication proteins [BR:
spkc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KC8_12505
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KC8_12505
TLS (translesion DNA synthesis) factors
Other SOS response factors
KC8_12505
Mitochondrial biogenesis [BR:
spkc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
KC8_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
ARS28094
UniProt:
A0A1X9YGY8
LinkDB
All DBs
Position
complement(2618631..2619203)
Genome browser
AA seq
190 aa
AA seq
DB search
MAGSVNKVILVGNLGRDPESRSFQNGGKVVNLRIATSETWKDRATGERREKTEWHSVAIF
NEGLARTAEQYLRKGSKVYIEGQLQTRKWQDQSGADKYSTEIVLQGFNSQLVMLDGPGGG
SGGGGRGGSGAGGSSGWDEGDSGFGGSGSSGMSSGGGFGGGGGGGRSGGTGGGARPSNPF
DSDLDDDVPF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcgtgaacaaggtgatcctcgtcggcaatctgggccgcgatcccgaatcg
cgcagcttccagaatggcggcaaggtggtgaatctgcgcatcgccacatccgaaacctgg
aaggatcgcgccaccggcgaacgccgtgaaaagaccgaatggcattcggtggcgatcttc
aacgaaggtctggcgcgtacggccgaacaatatctgcgcaagggcagcaaggtctatatc
gaaggccagcttcagacgcgcaaatggcaggatcagtcgggcgcagacaaatattccacc
gaaatcgtgctgcagggcttcaacagccagctggtgatgctggatgggccgggtggcggc
tcgggcggcggcggccgtggcggttcaggcgcgggcggcagcagcggctgggacgaaggt
gattccggttttggcggttcgggttcgtcgggcatgagcagcggcggcggtttcggcggc
ggtggcggcggtggccgctcgggtggcaccggtggcggtgcgcgtccatccaatccgttc
gacagcgatctcgacgacgacgtgccgttctga
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