Sphingomonas sp. KC8: KC8_18410
Help
Entry
KC8_18410 CDS
T04987
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KC8_18410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_18410
Enzymes [BR:
spkc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KC8_18410
DNA repair and recombination proteins [BR:
spkc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KC8_18410
Prokaryotic type
KC8_18410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARS29249
LinkDB
All DBs
Position
complement(3794476..3795165)
Genome browser
AA seq
229 aa
AA seq
DB search
MNDTIKLHESWKQPLAPEFASPRMQALKAFLIDEKANGKRIFPKGNEYFRALDLTPLDRV
RVVILGQDPYHGEGQAHGLCFSVKPGVRPPPSLVNIYKELESDLGIARPGHGFLEHWAQQ
GVLLLNSVLTVEMAQAASHQRKGWEEFTDAIIRLVNDRAEPTVFLLWGAYAQRKAAFVDA
GRHLILKAAHPSPLSAHNGFFGCRHFSQTNAFLVERGLDPIDWTLPATV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacacgatcaaactccacgaaagctggaaacagccgctcgcgcccgaatttgcc
agcccgcgcatgcaggcgctgaaggcgttcctgatcgacgagaaagcgaacgggaaacgc
atctttcccaagggcaacgaatatttccgggcactcgatctgaccccgctggatcgcgtg
cgcgtcgtcatcctggggcaagacccctatcatggcgaagggcaggcgcacggcctgtgc
ttcagcgtgaagcccggcgtgcgcccgccgccctcgctggtgaatatctacaaggaactg
gaaagcgacctcggtatcgcgcggccgggccacggattcctcgaacattgggcgcaacag
ggcgtattgttgctcaacagcgtattgaccgtcgaaatggcgcaggccgcttcgcaccag
cgcaagggctgggaagaatttaccgacgcgatcatccgcctcgtcaacgatcgcgcggag
ccgaccgtgttcctgctgtggggcgcttatgcccagcgcaaggccgcgttcgtcgacgcc
ggccgccatctcatcctgaaggccgcgcacccgtcgcccttatccgcgcataacggcttt
ttcggctgccgccatttctcgcaaaccaatgcattcctcgtcgaacgcgggctcgatccg
atcgattggacgttaccggccacggtgtaa
DBGET
integrated database retrieval system
