Sphingomonas sp. LK11: AV944_04980
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Entry
AV944_04980 CDS
T04954
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
splk
Sphingomonas sp. LK11
Pathway
splk02024
Quorum sensing
splk03060
Protein export
splk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AV944_04980
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AV944_04980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV944_04980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
splk02044
]
AV944_04980
Secretion system [BR:
splk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AV944_04980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Adeno_E3_CR2
DUF6560
Motif
Other DBs
NCBI-ProteinID:
APX65303
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Position
1034165..1035529
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AA seq
454 aa
AA seq
DB search
MASAADQMAQSISLAKFAKATDLKKRLWFTIGALIVFRLLSYVPLPGVDPTALGLLSQKT
TGGVLDFFNTFSGGSLSRMSLIALGVMPYITASIVVQLATSLSPQLAAIKKEGESGRKKL
NQYTRYGTVLLTAIQGYFIAVGLETLGASQGIQAVIEPGMTFRIAAVISLIGGTMFLMWL
GEQITSRGIGNGVSLIIMAGIVAHLPTTLVNLLEGGRTGSIDPVRLIGIIVAVVVLILFI
CFMERAQRRILIQYPKRATQRGMQADRSHLPLKINTAGVIPPIFASSLLLMPLTISQFAG
QRVAGESRWGDFIISLNQYLQHGSPVYMLLYGAGIIFFSFFYTAVVFNPEETADNLKRYG
GFIPGIRPGKNTETYLDYVLTRITVLGAAYLTIICLLPEYLVSALQIPFYLGGTSLLIVV
NVTMDTVTQIQSHLLAHQYGDLIKKAKLKGGRLR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcagccgaccagatggcgcaaagcatcagcctggcgaaattcgccaaggcc
accgacctcaagaagcggctgtggttcaccatcggcgcgctgatcgtcttccgcctgctc
agctatgtcccgctgccgggcgtcgacccgaccgcgctgggcctgctgagccagaagacc
acgggcggcgtgctcgacttcttcaacaccttctcgggcggttcgctcagccggatgtcg
ctgatcgcgctgggcgtgatgccgtacatcacggcgtcgatcgtcgtgcagctcgcgacc
tcgctcagcccgcagctcgccgccatcaagaaggaaggcgagagcggccgtaagaagctg
aaccagtatacccgctacggcaccgtgctgctgaccgcgatccagggctatttcatcgcc
gtgggtctcgagacgctgggcgccagccaggggatccaggcggtgatcgagccgggcatg
accttccgcatcgcggcagtcatctcgctgatcggcggtacgatgttcctgatgtggctg
ggtgagcagatcaccagccgcggcatcggcaacggcgtgtcgctgatcatcatggccggc
atcgtcgcgcatctgccgaccacgctggtcaacctgctcgaaggcggccggaccggcagc
atcgatccggtccgcctgatcggcatcatcgtcgcggtcgtcgtcctgatcctgttcatc
tgcttcatggagcgcgcgcagcgccgcatcctgatccagtatccgaagcgcgcaacgcag
cggggcatgcaggccgatcgcagccacctgcccctgaagatcaacacggcgggcgtgatc
cctccgatcttcgcctcgtcgctgctgctgatgccgctgaccatctcgcagttcgcgggc
cagcgcgtggcgggcgagagccgctggggcgacttcatcatcagcctgaaccagtatctg
cagcacggcagccccgtgtacatgctgctctacggcgcgggcatcatcttcttctcgttc
ttctacaccgcggttgtcttcaacccggaagagacggcggacaatctgaagcgctatggc
gggttcatccccggcatccgtccgggcaagaacaccgagacctatctcgactatgtgctg
acccgcatcacggtgctgggcgcggcctatctgacgatcatctgtctgctgccggaatat
ctggtctccgcgctccagatccccttttatctgggcggcaccagcctgctgatcgtcgtc
aacgtgacgatggacacagtgacccagatccagagccacttgctggcgcatcaatatggc
gatctgatcaagaaggcgaagctgaagggcggtcgcctgcgctga
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