Serratia inhibens: Q5A_006015
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Entry
Q5A_006015 CDS
T04576
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sply
Serratia inhibens
Pathway
sply03030
DNA replication
sply03430
Mismatch repair
sply03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5A_006015 (holA)
03430 Mismatch repair
Q5A_006015 (holA)
03440 Homologous recombination
Q5A_006015 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sply03032
]
Q5A_006015 (holA)
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_006015 (holA)
Enzymes [BR:
sply01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5A_006015 (holA)
DNA replication proteins [BR:
sply03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5A_006015 (holA)
DNA repair and recombination proteins [BR:
sply03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5A_006015 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ANS41685
UniProt:
A0A1B1KMM5
LinkDB
All DBs
Position
complement(1275937..1276971)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLIRQAAQQQQFTEHYSISLDAHTD
WDAIFSICQAMSLFASRQTLLLIFPENGPTAPIGEQLIKLAALLHDDILLMLRGPRLTKA
QENSAWFKALSPNGAYVSCQTPEQAQLPRWVMQRAKSMKLELDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVELAVNDAAHFTPFHWLDALLAGKSKRAWHILQQMQQED
VEPVILLRTLQRELLQLLNLQRRMASVPLRTLFDQYKVWQNRRNLVTQALQRLSGAQLQQ
AVHLLAQIEITLKQDYGQSVWPELETLSMLLCGKPLATSFSDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtatttatcctgaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttactgagtggcaatgaaccgttactgctgcaggaaagccaggatctgatccggcag
gccgcgcaacagcagcagttcaccgagcactacagcatttctctcgacgcccataccgac
tgggacgccattttcagcatctgccaggccatgagcctgttcgccagccgccagacgctg
ctgctgatcttcccggaaaacggcccgaccgcccctatcggtgaacaactgatcaagctg
gcggctctgctgcatgacgacattttgctgatgctgcgcggccctcgcctgaccaaagcg
caggaaaacagcgcctggttcaaagcgcttagcccaaatggcgcttacgtcagttgccag
acgcctgaacaggcgcagttgccgcgctgggtgatgcagcgtgccaaaagcatgaagctc
gagctggacgatgcggccaatcaactgctgtgttactgctacgaaggcaacctgctggcg
ttatcacaggcgctggaaaggctgtctctgttgcacccggacggtaaactcacgctgccg
cgcgttgaactggcggtcaatgacgccgcccactttacgccattccactggctggacgcc
ctgctggcaggcaaaagcaagcgcgcctggcatatcctgcagcaaatgcagcaggaagat
gtcgaaccggtgatcctgctgcgcaccctgcaacgcgaactgctgcaactgctgaacctg
caacgacgcatggcctccgtgccgctgcgcacgctgttcgatcaatacaaggtctggcaa
aaccgtcgcaacctggtgacgcaggcgctgcagcggctgtccggcgctcaattgcagcaa
gcggtccatctgctggcgcaaattgaaatcacccttaaacaggattacggtcagtcggtg
tggccggaactggaaaccctgtcgatgctgctgtgcggcaaacccctggccacgagtttt
tcagatgcccactaa
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