Sphingobium sp. MI1205: K663_14630
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Entry
K663_14630 CDS
T04383
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K663_14630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_14630
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K663_14630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K663_14630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
DUF87
AAA_16
SWI2_SNF2
Microtub_bd
AAA_22
Peripla_BP_6
AAA_33
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMK19304
UniProt:
A0A126RB75
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All DBs
Position
1:2969403..2971586
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AA seq
727 aa
AA seq
DB search
MTIQIRTTLDEPQTGEGFVPHRPARPEKSEGGRPFKLVSDYEPSGDQPTAIAELVETALA
GEKDQVLLGVTGSGKTFTMAKVIEALQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMTFSMKKGQVEDQREIIRKLVALQYKRNDAAFARGTFRVKGDNLEIFPSHYEDT
AWRVSFFGNEIEDIVEFDPLTGKKVATLEYVKVFPNSHHVTPGPTLKQAMEAIRHELTER
LKELTTEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGKWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVAAQGYRTL
VTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALNETSR
RREKQTAYNLEHGITPTTIKRNIGDIIAHVASKDQVTVDTGLEDRPHLVGHNLRAYIEDL
EKKMRAAAADLEFEEAGRIRDEIRKLEAEELGLPADEHVATPRGRATEGKPGTRKLRYGK
TQRKFGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcaaatccgcaccacgctggacgagccccagaccggcgaaggcttcgtcccc
caccgccccgcgcgccccgaaaagagcgaagggggtcgaccgttcaagctggtttcagac
tatgagccttcgggcgaccagccgacagccatcgccgaactggtggaaacggcactggcg
ggcgagaaggaccaggtgctcctcggcgtcaccgggtcaggcaagaccttcaccatggcg
aaggtgatcgaggctttgcagcgccccgcgctggtgctggcgccgaacaagattctggcg
gcacagctttacggggagttcaagagcttcttccccgaaaatgccgtcgaatatttcgtc
agctattatgactattaccagcccgaagcctatgtgccccgctccgatacctatatcgag
aaggaatcgagcgtaaacgaggcgatcgaccggatgcggcattcggcgacgcgcgcactt
cttgagcgggacgatgtactaatcgtcgcatcggtatcctgcctctacggcatcggatcg
gtcgaaacctattcggccatgaccttctccatgaagaagggccaggtcgaggaccagcgg
gagatcatccgcaagctggtagcgctgcagtataagcgcaacgatgcggccttcgcgcgc
gggactttccgggtgaagggggataatctggagatattcccgtcccactatgaagatacg
gcgtggcgggttagcttctttggcaatgaaatagaggatatcgtcgaatttgatccgctg
accgggaagaaggtcgccaccctcgaatatgtgaaggtctttcccaattcgcaccatgtg
acgccgggaccgacgctgaaacaggccatggaggcgatccgccatgagctgacggaacgg
ctgaaggaactgacaacggaaggaaaactgctggaggcgcagaggctggagcagcggacc
aatttcgacctggagatgatcgcggcgaccggttcctgcgcggggattgaaaattacagc
cgcttcctgacgggccgtctgcccggcgagccgccgccgacgctgtttgaatatctaccg
gaaaatgcgctgctgttcgtggacgaaagccaccagacggtgccgcaaatcggggccatg
gcgcggggcgaccatcggcgcaagatcacgctggccgaatatggattccgcctgccaagc
tgcatcgacaaccggccgctgcgtttcaatgaatgggacgcgatgcggccacagacggtc
agcgtttccgcaacgccgggcaaatgggagatggagcagaccggcggcgtattcagcgag
caggtgatccgtccaaccggactcatcgacccgccggtcgaaatcaagccggtcgaggat
caggtggacgacctgatcaacgagtgccgcaaggtggcggcgcagggataccgcacgctc
gtcaccacgctgaccaagcggatggccgaagacctgaccgagttcatgcacgaggcgggc
ataaaggtccgctatatgcacagcgacgtcgagacgctggaacgcatcgaactgatccga
gacctgcggctgggcgtctatgacgtgctgatcggcatcaacctgctgcgcgagggtctg
gacatccccgaatgcggtctggtggctatccttgacgccgacaaggaagggttcctgcgc
tccgaaacgtcgctgatccagacgatcggccgcgcggcgcgtaatgtggatggacgggtg
atcctctatgccgaccgcatcaccggcagcatggagcgagcgctgaacgaaacatcgcgg
cggcgcgagaagcagacggcctataatctggaacatggcatcacgccgacgacgatcaag
cgcaacatcggcgacatcatcgcccatgtggcgagcaaggatcaggtcaccgtcgatacg
ggactggaggaccgcccgcacctggtcggccacaatctgcgcgcctatatcgaggacctg
gaaaagaagatgcgcgcggcggcggcggacctggagttcgaggaagctggccgcatccgc
gacgaaattcgcaagctggaggcagaggaactgggcctgcccgccgacgagcatgtggcc
acgccgcgcgggcgcgcgaccgaaggaaagcccggcacccggaaactccgctatggcaag
acgcagcggaagttcggacgctga
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