Schizosaccharomyces pombe (fission yeast): 2539821
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Entry
2539821 CDS
T00076
Symbol
npl4, SPOM_SPBC1711.10C
Name
(RefSeq) ubiquitin ligase complex subunit Npl4
KO
K14015
nuclear protein localization protein 4
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
2539821 (npl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2539821 (npl4)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
2539821 (npl4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
2539821
NCBI-ProteinID:
NP_595883
PomBase:
SPBC1711.10c
SPBC1711.10c.1
UniProt:
Q9P780
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Position
II:complement(join(2152459..2152575,2152627..2154144,2154207..2154287,2154333..2154335))
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AA seq
572 aa
AA seq
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MILRFRSKRGMARAEFQPTDTLAMLSAKILSDILKNDYSPENVSLCQNESDQGVIFSNLN
DQTLQDAGLTHGQMLYLRLGTPNSDIASSNNEPALTVTGAPKQVSTPDVSEKKPSMPVIQ
DPIDDSLEKEDGLIRRSMTSLCRHGPKGMCDYCSPLEPYDESYRQENKIKHLSFHAYLRK
INSNVNKYASSQSFIPPLEEPSFTVKEKCPSGHPPWPAGICTKCQPSTVMLNLQPFRVID
HIEFASPGIVDSFLNKWRQSGFQRIGYTYGHFEQYNNVPLGIKGVIEAIYEPPQVSEADG
VTLEEWADEALVEQVATACGLRRIGIIFTDLTDDGSNSGKVLCKRHSDSYFLSSLEVYNS
ANFQTKFKNPCKWSRSGYFGSKFVTSVISGNLNGEIEVMSYQVSNIGTALYQADLIQPSV
DPDRMLVKKEDQTRYVPDVLYRYTDKYGKQVSENAKPAFPVSFLLVTLTDGFPEKPDPLF
SNNDTSIITTLESTDETGRLRQLAKLFDHNAIANGSLSNFSVLLAIAKLSILGKDDLAAL
ASYATAPTEENEKNLNSRESYQTLLAILYSSL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgattttgcgctttcgcagcaaacgggggatggcccgtgcagaatttcagccaactgat
actttggctatgctgtctgcaaagattttgtctgatatacttaaaaacgactactctccc
gaaaatgtttctctttgccagaatgaatctgaccagggtgtcattttttccaacctgaat
gatcaaactcttcaagatgctggattgactcacggtcaaatgctttacttaagacttggt
acaccaaatagtgatattgcttcatcaaacaatgaacctgctctcactgtaactggtgcc
ccaaagcaggtttccacacctgatgtttcagaaaaaaaaccttctatgcctgtcattcaa
gatcccattgatgattctttagaaaaagaagatggcttgatacgtcgttccatgacctct
ttatgtcggcacggccctaaaggaatgtgcgactattgctcgcctttagaaccgtatgat
gaatcctatcgacaagaaaataaaatcaagcacctttcctttcatgcttatttgagaaaa
ataaactctaatgtgaataaatatgctagctctcaatcgtttattcctcctcttgaggag
cctagttttacagtgaaagaaaagtgtccttctggtcatcctccttggcccgctgggatt
tgtaccaaatgccaaccatcaactgtaatgctcaatctccaaccatttcgtgttattgat
catattgaatttgcttctcccggcattgtcgattcgtttctcaataaatggcgtcaatcc
ggttttcaaaggattggttatacgtatggacatttcgaacaatacaataacgttccttta
ggaattaagggagtgattgaagctatatacgaaccccctcaggtttcggaggctgacggc
gttacattagaggaatgggccgatgaagcccttgtagaacaagttgcaactgcttgtgga
ttgagaagaattggtattatctttactgatctgacagacgatggtagtaattctggaaaa
gtactttgtaagagacactctgattcttattttctatcgtctttagaagtctacaactct
gcaaattttcaaaccaaatttaagaacccctgtaaatggtctcgcagcggttattttggg
tccaagtttgtaacatctgttattagcggtaatctaaatggggaaattgaagttatgtct
taccaagtctcaaatatcggtacagctctataccaagcagatcttattcaaccaagcgtc
gatcctgatcgcatgttggttaaaaaagaggatcaaacaagatacgttccagatgtcctc
tatcgatatacggataagtatggaaaacaagtatcagaaaatgcaaagcctgcatttccg
gtcagttttctgttagttacgctaacggacgggtttcctgaaaagcccgatcctttgttt
tctaacaatgatacgagtattattaccacattagaaagtactgatgaaaccggccgtttg
agacagcttgcgaaactttttgatcataatgcgattgctaatggcagcttgtcaaatttt
tcagtacttttagctatagctaaactctctatattaggaaaggacgaccttgctgccctt
gcttcctatgccactgctcctactgaggaaaatgagaagaatttgaattctagggagagt
tatcaaacgttgctagccattctatatagtagtttgtga
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