Schizosaccharomyces pombe (fission yeast): 2543222
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Entry
2543222 CDS
T00076
Symbol
slp1, SPOM_SPAC821.08C
Name
(RefSeq) ubiquitin ligase Slp1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04111
Cell cycle - yeast
spo04113
Meiosis - yeast
spo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
2543222 (slp1)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
2543222 (slp1)
04113 Meiosis - yeast
2543222 (slp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spo04121
]
2543222 (slp1)
03036 Chromosome and associated proteins [BR:
spo03036
]
2543222 (slp1)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
2543222 (slp1)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
2543222 (slp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
RMC1_N
Beta-prop_WDR41
KNTC1_N
Beta-prop_RIG_1st
Beta-prop_Vps41
MIOS_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
2543222
NCBI-ProteinID:
NP_593161
UniProt:
P78972
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:complement(995476..996942)
Genome browser
AA seq
488 aa
AA seq
DB search
MEIAGNSSTISPTFSTPTKKRNLVFPNSPITPLHQQALLGRNGRSSKRCSPKSSFIRNSP
KIDVVNTDWSIPLCGSPRNKSRPASRSDRFIPSRPNTANAFVNSISSDVPFDYSESVAEA
CGFDLNTRVLAFKLDAPEAKKPVDLRTQHNRPQRPVVTPAKRRFNTTPERVLDAPGIIDD
YYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL
GNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL
QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN
LLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS
YSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPIPITKT
PSSSITIR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagatagcaggtaattcttcaaccatatcgcctacattttcaacacccacaaagaaa
aggaacttagtcttccctaacagccctataactcccctgcatcagcaggcacttttaggc
cgtaacggtcgttcttccaagcgttgctcccctaaatcttcttttatcagaaactcacca
aaaatcgatgtagtaaatacagattggtctattccactatgcggatcaccacgaaacaaa
agtcgtcctgccagtcgaagtgaccgctttattccttctcgtccaaacactgctaatgct
tttgtaaattctatcagcagtgacgttccttttgattatagtgaatcagttgctgaagca
tgcggttttgatttaaacacgcgtgttctcgcctttaaattggatgctcctgaggccaaa
aagcctgtagacttgcgcactcaacacaatcggcctcaaagacctgtggttacaccggct
aaacgacgctttaacactactcctgaacgagttttagatgctcctggtatcattgatgat
tactacttgaatttgctggattggtcaaacttaaacgtcgttgctgttgctttggagcgc
aatgtgtatgtttggaatgctgatagtggttcggttagcgctttggcagaaaccgatgaa
tcaacctatgttgctagtgtaaaatggtctcacgatggttcatttttatccgtcggtctt
ggaaacgggctcgttgatatatatgatgttgaatcacagacaaaacttcgaacaatggca
ggccatcaagctagagttggttgtctctcctggaatcgtcacgttctgtcgagtggtagc
cgttctggcgctattcatcatcatgatgtgcgtatcgctaatcatcagattgggactctt
cagggacactctagtgaagtctgtggtttggcgtggcgttcagacggtcttcagttggcc
tctggcggtaatgacaacgttgttcaaatttgggatgccagatcttcgattcccaaattt
accaaaaccaaccataacgctgctgtaaaggcagttgcttggtgcccttggcaaagtaat
ctattggcgacaggcggtggcacaatggataaacagattcacttttggaatgctgccact
ggtgcaagagttaacaccgtggatgcgggtagtcaggtcacttcactgatttggagccct
cattctaaagaaatcatgtctactcatggctttccagataacaatttgtctatatggtct
tatagtagcagcggattaaccaaacaagttgatattcctgcacatgatacccgagttttg
tattcagctttatcgcctgatggaagaattctttcaactgcagccagtgatgagaatctg
aaattttggcgagtttatgatggggaccacgttaaaaggcccattccaattaccaaaacc
ccgtccagcagcataacaatccgttga
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