Schizosaccharomyces pombe (fission yeast): SPCC1442.10c
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Entry
SPCC1442.10c CDS
T00076
Symbol
rpb3
Name
(RefSeq) RNA polymerase II subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020
RNA polymerase
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPCC1442.10c (rpb3)
09124 Replication and repair
03420 Nucleotide excision repair
SPCC1442.10c (rpb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPCC1442.10c (rpb3)
03400 DNA repair and recombination proteins [BR:
spo03400
]
SPCC1442.10c (rpb3)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SPCC1442.10c (rpb3)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SPCC1442.10c (rpb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
2538816
NCBI-ProteinID:
NP_588324
PomBase:
SPCC1442.10c
UniProt:
P37382
Structure
PDB
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All DBs
Position
III:complement(1782897..1787006)
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AA seq
297 aa
AA seq
DB search
MDSETHITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDE
FLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDCDQYCPKCSVELFLNAKCTGEGTMEIYAR
DLVVSSNSSLGHPILADPKSRGPLICKLRKEQEISLRCIAKKGIAKEHAKWSPTSAVAFE
YDPWNKLQHTDYWFENDADAEWPKSKNADWEEPPREGEPFNFQEEPRRFYMDVESVGSIP
PNEIMVQGLRILQEKLAVLVRDLDEEQPTQLSANELNMEENAEMNWSPYQNGEENTW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaaacgcatattacgatacgaaatataagtaaaaactcggtggattttgtc
cttacaaatacaagtttggcagttgcaaactcgctgcgacgtgttgtacttgcagagatt
ccaacagtggccattgacctagttgaaattaatgtgaatacctcagtcatgcctgatgag
tttctagcacatcgtcttggtatgatacctctggatagctccaacatcgatgaaccgcct
ccagtaggtttggaatatacgcgcaattgcgattgcgatcagtattgtcccaagtgttca
gtcgagttgttcctaaatgccaaatgtactggtgagggtacgatggaaatttatgctaga
gatcttgttgtttcttctaactcttctcttggacaccctattctcgccgatccaaaatca
cgcggaccgcttatttgcaaactcagaaaagagcaggaaatttctctgcgttgcattgcc
aagaagggtatagctaaagaacatgctaagtggtcacctacttcagctgttgcatttgaa
tacgatccatggaacaagttacagcatactgattactggtttgagaatgatgcagatgca
gagtggccaaaaagcaaaaatgccgattgggaagaaccaccgcgggaaggcgaaccattc
aacttccaagaggaaccgcgtcggttttatatggatgtcgaaagtgtcggttctatacca
cccaatgaaataatggttcaaggtttacgaattcttcaggaaaagcttgcagttttagtt
cgtgatctcgacgaagagcagcctactcaactttctgctaacgaactgaatatggaggag
aatgcagaaatgaactggtctccctatcaaaatggtgaagaaaacacgtggtag
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integrated database retrieval system
