Spongiibacter sp. IMCC21906: IMCC21906_01822
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Entry
IMCC21906_01822 CDS
T03945
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC21906_01822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_01822
Enzymes [BR:
spoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IMCC21906_01822
DNA repair and recombination proteins [BR:
spoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC21906_01822
Prokaryotic type
IMCC21906_01822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKH69497
LinkDB
All DBs
Position
1951385..1952062
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AA seq
225 aa
AA seq
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MPDIQLNASWLSKIGSEFEKTYMQDLRLFLKDKKRHGIEIYPSNDNWFAALNATAFDDVK
VVILGQDPYHGAGQAHGLCFSVLPGSPVPPSLRNIYKELHADLGIDIPSHGYLQRWADQG
VLLLNSVLTVEDGQAGAHQGRGWEQFTGEIISALDRDRSGLVFMLWGSHAQKKGAKINRD
KHLVLKAPHPSPLSAYRGFLGCRHFSQANAYLGQRAVDWTLPVEP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattcagctaaacgcatcgtggttgtctaaaattggtagtgagtttgaaaaa
acttacatgcaagatttgcgattgttcttaaaggataaaaagcgccatggcatagaaatt
tatccttctaatgacaactggtttgccgctttaaatgccactgcatttgacgatgttaaa
gtcgttatcttggggcaggatccttaccatggtgcgggtcaagctcatggcttatgcttt
tcagtgttacctggcagccccgtgccgccttcattgcggaatatttataaggagctgcat
gctgacctcggtattgatattccctctcatggttatttacaacgctgggcagaccagggt
gtgctgctgttaaacagcgtcctaacggttgaagacggtcaagctggtgctcatcagggc
cgaggctgggaacaattcacgggcgaaatcatctcggctttggaccgcgaccgcagtggt
ttggtttttatgctttggggcagccatgctcagaaaaaaggtgcaaaaattaatcgagat
aagcacttggtgttaaaagcgcctcacccgtcaccgttatcggcatatagaggtttttta
gggtgccgacatttttctcaagctaatgcttatttagggcaacgggcggttgattggacg
ctcccggtcgagccttag
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